| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3329 |
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| Symbol | |
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| ID | 5370319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3960857 |
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| End bp | 3963019 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640831588 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001367519 |
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| Protein GI | 153001838 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCTT TTTATATTCC CAAGCGCGTT GCGCTTTTGC TGGGCGCCTT GTTTGTGCTC
AATCCTATTT CAATGCTGTT GGCTGCGGAG GATGCTCAAT CTGGTAATGC TATTTTAGAG
ACTGACATTG AGCGTTTAAG TATCCACTAT CGTCAAGCTT ACCGTGGCAA TGTGTCTGCA
ACTGAACTTC CCCAAGCGAT CAGTGTGTTA GATGAGCAAT TGATCAAAGA TGCGGGGCTA
ACGCGGTTTC AAGATGTGCT GGATTATTCC GCCAGTGTGG CGCGGCAAAA CAATGGCGGC
GGTTTGTGGG ATAGCTTTTC CCTGCGCGGC TTTCCGGGCA ACGAAAACAT GCCATCGGGC
TATTTAATCA ATGGCTTTAA TGGTGGTCGA GGTTTTAGTG GTCATCGAGA TTTATCAAAT
GTGGCCTACG TGGAGATCTT AAAAGGCCCA GGTTCGGCGC TTTATGGTCG CTCTGAGCCC
GGCGGTACAG TTAATATTGT GACTAAGAAA CCTCAGTATC AAACTAGTGG TTATTTAAAG
GCATCGGCAG GGAGTTTCGA TCAATATCGA TTAGAGGGGG ATGTGACTTC CGGCTTGACC
GACAATGTGG CATTTCGAAT TAACGGCGCG TGGCAGGAAC ACGATAGTTT TCGCGATTAT
GTGTTCAGCG ATAAAAAAAT CGTCACGCCG TCAGCGCGTT GGCAGATTTC CGATAAAGCC
TCGCTACTCT ATGAAATGGA ATACCTCAAG CAAGAACAGT TATTCGATCG CGGCATTATT
GTGCTCAACA ATGATATCAA TACTGTGCCA CGCTCGCGTT ATTTAGGTGA GCCTAATGAT
GGCGCAACTG TGGTCAATGC CACTGGGCAC CAGCTGACCT ATGACTATGA ATTAAATGAT
GATTGGTCAT TAACCGCGGG CTATAACTAT CGCGATTCTA GCTTAAAGGG CTATTCGTCC
GATGCTGAGT TAGCTCGGGG GCGCCAATCA CTATTTGATG ATGGTCGCAC GCTCACCCGG
CAGCACAGAT ACCGCGATTA TGCCTCCGAG GATAATTCAC TGCGTCTAGA GTTAAGTGGG
CATGTGGATA CGGGGTTCAT TCGCCACAAT TTGCTGCTCG GCGCCGATGC CTATCACTAC
AGTTTAAAGA CAGGATTGTA TCGCTATCGC GGCAAAAAGG GCGAATATGC CATTGATATT
TATGAGCCGC AATATGGTGG GCCTCAGCCA GAGGTGAGTT TGTTGTATGA GAATAACGAA
ACCCAAAAGG CGTGGGGCAC ATACCTGCAA GATCAAATGG ATCTTACTGA AAAGTGGAAG
TTGCACCTTG GGTTAAGGTT CGATAGCTAT CAGCAAGATA TCAGTGAAGT CGCTAAAAAT
ACGTTATCAG AGCAAACCGA TAGCAGGGTT AGCCCTAAAG TGGGTCTGGT GTATTTATGG
TCCGATGCCT TAAGTTTCTA TAGTTCTTAT TCTGAAGGCT TTTTACCGCT TTCTGGAACC
GACTACACGG GTAAGCCTTT CGAAGCCGAA GAGAGCAAGT CAGTTGAGCT AGGGATGAAG
TTTAATGGCA ATTGGTTTAC AGGCTTAGCT GAGAACGGCA TAGCAGTCAG TGGCAGCTTG
GCGGTGTTTG ATGCGCAAAA GAGCAATATT CTGACCTCAG ATCCGCTCAA TGTCGGATTT
TCAGCCACTT TAGGTAAAGC AAAAAGTAGC GGTGTTGAAC TCGATTTAGT TGCCGAGCTG
ACGGAGGATT TGCAGGCCAG ATTATCCTAC GCCTATTTGA ATACCCGCAC TGCCAACGAC
AGCTTGAATC CAGACTGGGG CGTGCTTATT CCTGCGGGAA GTCCACTGGT GAATGTGCCA
AAACATACTG CGAGTGTGAT GCTGAAGCGG GATCTGAATG CGTTTTCTAT CGATGGACAT
TTAGGCATGA GTTGGCGTTA TGTGGATTCA CGCCTTGGTG ATTCTGCCAA TCCGAGTTTC
CAATTACCGT CGTATCAGTT GCTTGGAGTG TTTATGAATA CGCACTTGAG CGACAACTTC
GTCCTTGGTG TCAATCTGGA CAACTTATTG GATGAGCACT ATATCGCCAG CAGTTATTCG
GCGCTCTGGG CGGTACCCGG TGAGCCACGT AGCATTAAAG TGAGTGTCAG CTATGAGTTC
TAA
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| Protein sequence | MTSFYIPKRV ALLLGALFVL NPISMLLAAE DAQSGNAILE TDIERLSIHY RQAYRGNVSA
TELPQAISVL DEQLIKDAGL TRFQDVLDYS ASVARQNNGG GLWDSFSLRG FPGNENMPSG
YLINGFNGGR GFSGHRDLSN VAYVEILKGP GSALYGRSEP GGTVNIVTKK PQYQTSGYLK
ASAGSFDQYR LEGDVTSGLT DNVAFRINGA WQEHDSFRDY VFSDKKIVTP SARWQISDKA
SLLYEMEYLK QEQLFDRGII VLNNDINTVP RSRYLGEPND GATVVNATGH QLTYDYELND
DWSLTAGYNY RDSSLKGYSS DAELARGRQS LFDDGRTLTR QHRYRDYASE DNSLRLELSG
HVDTGFIRHN LLLGADAYHY SLKTGLYRYR GKKGEYAIDI YEPQYGGPQP EVSLLYENNE
TQKAWGTYLQ DQMDLTEKWK LHLGLRFDSY QQDISEVAKN TLSEQTDSRV SPKVGLVYLW
SDALSFYSSY SEGFLPLSGT DYTGKPFEAE ESKSVELGMK FNGNWFTGLA ENGIAVSGSL
AVFDAQKSNI LTSDPLNVGF SATLGKAKSS GVELDLVAEL TEDLQARLSY AYLNTRTAND
SLNPDWGVLI PAGSPLVNVP KHTASVMLKR DLNAFSIDGH LGMSWRYVDS RLGDSANPSF
QLPSYQLLGV FMNTHLSDNF VLGVNLDNLL DEHYIASSYS ALWAVPGEPR SIKVSVSYEF
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