Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3323 |
Symbol | lipB |
ID | 5370675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 3955904 |
End bp | 3956557 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640831582 |
Product | lipoate-protein ligase B |
Protein accession | YP_001367513 |
Protein GI | 153001832 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0321] Lipoate-protein ligase B |
TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00233986 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAAGACA CGACTTTGCA CATTCGACAT CTTGGAAAAC AAGATTACGA ATCAGTGTGG CATGCGATGC AGCATTACAC TGATACGCGC GACAGCGAAA GCCATGATGA ACTGTGGATT GTCGAGCATC CGCCCGTGTT TACCCAAGGC CAAGCCGGCA AAAGCGAGCA TATTTTAAAT GCTGGCGATA TTCCGGTTAT CCAAGTGGAC CGTGGCGGTC AAGTCACTTA CCACGGCCCA GGCCAACTAG TGGTATATCC TCTTCTCGAT ATAAAACGTA GTAAAGTCGG CGTACGTCAA CTCGTCACCC ATATAGAGCA AAGCATTGTC GATATGCTCG CCAAGTACGA CATTAACGCT TATGCCAAGG CAGATGCGCC AGGCGTATAT GTGGATGAAC GCAAAATCGC CTCCCTAGGA TTACGCATTC GTAAAGGCTG TTCATTCCAT GGATTAGCCC TCAATGTCGA CATGGATCTG GCGCCATTTC GCCGCATCAA CCCTTGTGGT TATGCCGGTC TTGAAATGGT GCAATGCAAA GCGCTTGGCG GACCACAAAC CGTGATTGAA GCGGGCGAGC AACTCACCAT TACTTTTAGC CAATTACTGG GCTATCAACA CCTAGTTCAT CATCAAGGAT TAGCAGCGTC ATGA
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Protein sequence | MQDTTLHIRH LGKQDYESVW HAMQHYTDTR DSESHDELWI VEHPPVFTQG QAGKSEHILN AGDIPVIQVD RGGQVTYHGP GQLVVYPLLD IKRSKVGVRQ LVTHIEQSIV DMLAKYDINA YAKADAPGVY VDERKIASLG LRIRKGCSFH GLALNVDMDL APFRRINPCG YAGLEMVQCK ALGGPQTVIE AGEQLTITFS QLLGYQHLVH HQGLAAS
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