Gene Shew185_3305 details

Gene Information

• Locus tag: Shew185_3305
• ID: 5371520
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 3938329
• End bp: 3938790
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640831564
• Product: putative metalloprotease
• Protein accession: YP_001367495
• Protein GI: 153001814
• COG category: [R] General function prediction only
• COG ID: [COG0319] Predicted metal-dependent hydrolase
• TIGRFAM ID: [TIGR00043] metalloprotein, YbeY/UPF0054 family

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCTTG ATTTAGCCTT AGATATTCAA CATGCCACCA CCTGCGACTG GTTGCCAACG 
GACGAGCAAT TCGCCCTTTG GGTCACAACC GCGATTGGCA ATAGCATGAA TGAAGCTGAA 
TTAACTATAC GTATAGTCGA CAGCCGCGAG AGTCAGATGC TCAATAGCAC CTACCGCGGC 
AAAGACAAAC CGACCAATGT GCTGTCATTT CCCTTTGAGG CACCGCCAGA AATTGAACTT 
CCTTTACTAG GAGATCTTGT CATTTGCGCG GCAGTCGTTG AAAATGAAGC CCGTGAGCAA 
CAAAAAACCT TAGAAGCGCA CTGGGCACAC ATGGTTGTAC ATGGTTGCTT GCATCTGCTA 
GGGTATGATC ACATCGAAGA TGAAGAAGCT GAAGAGATGG AGTCGTTAGA GACCCAACTC 
ATTGAAGGCT TAGGCTTTAC TGACCCATAT AAGGAACAAT AG 

 

Protein sequence

MSLDLALDIQ HATTCDWLPT DEQFALWVTT AIGNSMNEAE LTIRIVDSRE SQMLNSTYRG 
KDKPTNVLSF PFEAPPEIEL PLLGDLVICA AVVENEAREQ QKTLEAHWAH MVVHGCLHLL 
GYDHIEDEEA EEMESLETQL IEGLGFTDPY KEQ