| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3274 |
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| Symbol | |
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| ID | 5369955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3902175 |
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| End bp | 3903077 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640831524 |
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| Product | lipoprotein NlpI |
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| Protein accession | YP_001367464 |
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| Protein GI | 153001783 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000163193 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCTTA AAATTAGAAC CGCTGTCGTT GCTGTGCTGG CGGGCGCCAG TCTGTTGTTA
GCCGGATGCG CTACCACCCA GTCTCCTTTA GATAACCATA ATGATGTTGA AGGTAAATTG
GTTATCGCAC CTGTCATGCC TGATTATAAA GTGGAAGTGA CGTTAGCGAA GCTCAACGAG
ATTTTGGCTA CGGTCGAATT AACCAATGAG CAGAGAGCCA GATTTCATTA CGATCGCGGT
GTGATTTACG ACAGTGTGGG CTTAAGATTG CTCGCGCGCA TCGATTTTAT GCAAGCGTTA
AAACTTCAGC CTGATCTTGC TGATGCCTAT AATTTCCTTG GGATTTATTA CACCCAAGAA
GGCGAATACG CTAGTGCCTA TGAAGCGTTC GATGGTGTAT TAGAATTAGC TCCTAATTAC
GATTATGCCT ATTTGAATCG CGGTATTGCC TTGTACTATG GCGACCGTAA TGATTTAGCC
ACTAAAGATA TGCAGGCATT TTATGCTGGC GATAATAAAG ATGGTTATCG CGCATTATGG
TTATATTTGA TTGATTTTAA AGATGATGCA GTTGAAGCTA AAAAACAGTT AGCTGAAAAC
CGTAAGAATT TAGACAACAA TGCTTGGGCG ACCGTTATCG TTGATTATTA TTTAGGTACA
AAGAGCCATG ATGAGGTGTT TGCTGCTGCG AAAGTTGGCT TAACTCATCC AAAAGAATAT
GCCGAACGTT TATGTGAGGC TTATTTTTAC CTAGCGAAAA TGGCAATAGA AAACAAGCAA
TATCAAGATG CTGCTAATTA TTTCCGCCTC GCACTGGCGA CCAATATTTA TGATTTTGTT
GAACATAGAT ATGCGCGGAT TGAGCTCGCT AAAGTCAAAG GTTTGCTCGA AGACACAAAA
TAA
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| Protein sequence | MSLKIRTAVV AVLAGASLLL AGCATTQSPL DNHNDVEGKL VIAPVMPDYK VEVTLAKLNE
ILATVELTNE QRARFHYDRG VIYDSVGLRL LARIDFMQAL KLQPDLADAY NFLGIYYTQE
GEYASAYEAF DGVLELAPNY DYAYLNRGIA LYYGDRNDLA TKDMQAFYAG DNKDGYRALW
LYLIDFKDDA VEAKKQLAEN RKNLDNNAWA TVIVDYYLGT KSHDEVFAAA KVGLTHPKEY
AERLCEAYFY LAKMAIENKQ YQDAANYFRL ALATNIYDFV EHRYARIELA KVKGLLEDTK
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