| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3248 |
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| Symbol | |
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| ID | 5371992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 3884666 |
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| End bp | 3885928 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640831498 |
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| Product | HipA domain-containing protein |
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| Protein accession | YP_001367438 |
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| Protein GI | 153001757 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.980858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCTG CTGAATCAGT AGAGGCCCTC GCGCTTTATT TAAATCATCA ACGAATTGCG
ATACTCACCC ATTATTCTGG TGGTAAAAAC ATTCTGAAAT TTGACCCTGA ATATATCGCG
ATGCCAAAAG CACTTCGACC AACTTTAACG CTCACCCAAC TGCTAGACCC TCATTACATC
GATAAAATAC AAGTCAGAAC ACAAAGATTA TCACCAGTGC TGTCCAATTT GCTCCCCGAG
GGCGCATTGC GGCACTGGAT GTCAGCCGCG CTAAAAGTAC ATGAAAACAA CGAATTTCCT
ATACTAGCAT GGGCAGGGAA CAATCTTCCT GGCGGCTTAA TCGCATCAGC AATAGCAAAA
GAAGATATTC CAGCCTGGGC ATTATCACCA CGGGAAAGAA CAGAAGCTAT CGTAATCGAC
ATCACCCACA CCAGTAATAA GTTCTCACTT GCCGGTGTTC AAATGAAATT CTCGACAAGC
AGAAACGATG GACGATTCAA CATAAATGCC GATCAAGATG GCCAAGATAG TTGGATTATC
AAGACGCCTT CAACAGTACA TCGCAACGTT CCACAAAATG AATACACTGC AATGAAATTG
GCACAAATAA TCGGAGTGAA TATCCCTGAA ATTGAGCTCA TCTCGCTTAA CGCATTGGAT
AATCTACCTA ACATCAAACT CCCAGATGAA CCAACGGCAT ACGCAATTAA ACGCTTTGAC
CGCAGTGATA CGGGCCGCAT TCATGCAGAG GACTTTGCCC AAATATTCGA AGTTTACGCT
CATGATAAAT ACGGTAAATA CAACTACGAA GCCATAGCTA AAGCTCTATA TATGAGCAGC
TACAATGGAT TAAAAGACGT GCAGCAAATG GCAAGGCGGT TGCTGGCCAA TATCTTGCTC
GCCAACGGTG ATGCCCACTT AAAAAATTGG AGTGTTATCT ACCCAGATAC CCAAAATGCG
ATACTCTCAC CCGCTTACGA TATTGTCAGC ACCTTACCCT ATATAGAAGG CGAAACTGCC
ATAGCTCTCA ACATGAATAA ACAAAAGCTA TGGTACGCCA TCGATATCAC AACCTTCCAA
GCATGGGCAA CGAGAACAGG CCTACCATGG CCTGCGATAA AGGTTCATTT ACTGGATGCC
ATGCAAAAAG CCCGTACTCT TTGGCCAGAG GCACTTGCTG AACTCCCCAT GCATGAAGAG
CATAAAGCGA TATTAAAAGC TCACTGGGCC AAACTACATA ACGACTTTAA AATCCTCTGC
TAG
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| Protein sequence | MKSAESVEAL ALYLNHQRIA ILTHYSGGKN ILKFDPEYIA MPKALRPTLT LTQLLDPHYI
DKIQVRTQRL SPVLSNLLPE GALRHWMSAA LKVHENNEFP ILAWAGNNLP GGLIASAIAK
EDIPAWALSP RERTEAIVID ITHTSNKFSL AGVQMKFSTS RNDGRFNINA DQDGQDSWII
KTPSTVHRNV PQNEYTAMKL AQIIGVNIPE IELISLNALD NLPNIKLPDE PTAYAIKRFD
RSDTGRIHAE DFAQIFEVYA HDKYGKYNYE AIAKALYMSS YNGLKDVQQM ARRLLANILL
ANGDAHLKNW SVIYPDTQNA ILSPAYDIVS TLPYIEGETA IALNMNKQKL WYAIDITTFQ
AWATRTGLPW PAIKVHLLDA MQKARTLWPE ALAELPMHEE HKAILKAHWA KLHNDFKILC
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