| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3229 |
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| Symbol | deoA |
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| ID | 5372292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3852694 |
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| End bp | 3854025 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640831479 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_001367419 |
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| Protein GI | 153001738 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02643] thymidine phosphorylase
[TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0875906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCTAG CTCAAGAGAT TATTCGTAAA AAACGTAATG GTTTAGCGCT AAGTTCCGAA
GAAATACAGT TCTTTGTTCA AGGTATCACC ACCAACTCTG TATCTGAAGG TCAGATCGCC
GCATTAGGTA TGGCGGTGTA TTTTAATGAC ATGAATATGG ATGAAAGAAT CGCTTTAACG
ACAGCAATGC GTGATTCTGG CACTGTGCTT AATTGGCAAT CATTGGGACT CAACGGTCCT
GTCATCGACA AACACAGCAC TGGTGGTGTC GGCGATGTGA TTAGTCTCAT GCTTGGCCCT
ATGGCTGCGG CGTGTGGCGG TTATGTGCCT ATGATTTCTG GGCGCGGCCT AGGTCATACT
GGCGGTACAC TCGATAAGTT TGATGCCATT CAGGGTTACC AAACTGAGCC TTCAAGTGAA
TTGTTCCGCA AAGTGGTTAA AGAAGTCGGG GTGGCGATTA TTGGCCAAAC GGGCGATCTC
GTCCCTGCCG ATAAACGCTT CTATTCTATT CGCGATAATA CCGCCACCGT TGAATCCATT
TCCCTCATCA CTGCGTCGAT TCTGTCTAAG AAATTAGCCT GTAATTTAGA TGCGTTGGCG
ATGGACGTAA AAGTTGGTAG CGGCGCTTTC ATGCCAACCT ATGAGGCATC GGAAGAATTA
GCTCGCAGTA TCGCCGCCGT TGCAAATGGC GCTGGTACTA AAACGACGGC TTTACTTACC
GATATGAATC AAGTGCTTGC ATCTTGTGCA GGTAACGCGG TTGAAGTGAA AGAAGCCATC
GACTTTTTAA CGGGTGCTTA CCGTAACCCG CGTTTATATG AAGTCACTAT GGGTCTTTGT
GCTGAGATGC TGCTCCTCGG CGGTCTTGCA AGCAATGAAG CCGATGCTCG CGCTAAACTG
AATCGTGTAC TCGACAATGG TCGCGCTGCT GAACTCTTTG GCAAGATGGT GTCGGGTCTT
GGTGGTCCGG TTGATTTTGT TGAAAACTAC AGTAAATACC TGCCGCAGTC ACAAATTATT
CGTCCGGTTT TTGCCGATAT GCAAGGTTAT GCCTACAGCA TGGATACTCG TGAGTTAGGT
TTAGCGGTTG TGACCTTAGG TGGCGGCCGC CGTAAGCCCG GCGATGCACT AGACTATAGT
GTTGGCTTAA CCCAAGTGTG TGCCCTAGGC GATAAAGTGG ATTCATCGAC GCCGATTGCC
GTTATCCATG CACAGTCTGA AGCCGCCTTC GCGGAAGCGG AACTTGCGGT GAAAAAAGCG
ATTCACATTG GTGAAACCGC TCCAGAAAAA ACACCTGAGA TCTATGCCTA TATTCGTGCA
TCGGATCTTT AA
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| Protein sequence | MFLAQEIIRK KRNGLALSSE EIQFFVQGIT TNSVSEGQIA ALGMAVYFND MNMDERIALT
TAMRDSGTVL NWQSLGLNGP VIDKHSTGGV GDVISLMLGP MAAACGGYVP MISGRGLGHT
GGTLDKFDAI QGYQTEPSSE LFRKVVKEVG VAIIGQTGDL VPADKRFYSI RDNTATVESI
SLITASILSK KLACNLDALA MDVKVGSGAF MPTYEASEEL ARSIAAVANG AGTKTTALLT
DMNQVLASCA GNAVEVKEAI DFLTGAYRNP RLYEVTMGLC AEMLLLGGLA SNEADARAKL
NRVLDNGRAA ELFGKMVSGL GGPVDFVENY SKYLPQSQII RPVFADMQGY AYSMDTRELG
LAVVTLGGGR RKPGDALDYS VGLTQVCALG DKVDSSTPIA VIHAQSEAAF AEAELAVKKA
IHIGETAPEK TPEIYAYIRA SDL
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