Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3217 |
Symbol | |
ID | 5369926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3840428 |
End bp | 3841138 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640831468 |
Product | DNA-binding transcriptional regulator TorR |
Protein accession | YP_001367408 |
Protein GI | 153001727 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTTATA GTGTGCTCGT TGTCGATGAT GAAGCGGTTA TTCGTGCGCG ATTGAAGGGA TATTTTGAAA AGGAAGGTTA TCGCGTCGTT GAAGCTGCCG ATGGCGAGCA AATGTGGTAC GAATTTAATC GCCAACATAT CGATTTGATC ATGCTAGATA TCAATTTGCC CGGTGTCGAT GGTTTGAGCC TGACCCGTGA GCTGCGCAGT CGCTCCCATG TGGGCATCAT TCTGGTGTCT GGGCGGGATG AATCTATCGA CAAAATCGTT GGTCTCGAAA TGGGCGCCGA TGATTATGTG ACTAAACCTT TCGAGCTGAG GGAGTTGCTG GTTAGGGTAA AAAACCTTCT GTGGCGGATT TCCCTTGTGA AGCAAGCTGA GCTGGCGGTC GCCGAAGAAT TATCTCAACC GGACGATGTG ATCAGTTTCG AAGGTTATCA ACTCGAACTC AACAGCCGCA AATTACGCCA TGGCGATGCG TTGATCAAAC TCACCAAAGC GGAATTCGAG TTACTGGCCG CATTTGCCCT GCATCCGCAG CAAGTCTTAT CCCGCGAGCG TTTAATGCAG CAAACCAGCC ACCGTAATCT GGATGTTAAT GACAGAACGA TCGATGTGAT CATTCGCCGT CTTCGCAATA AACTCGACAC TGAATTGTTT GTCACTATTC ATGGCGAAGG CTATTTATTT GCCGCTAAAG TGGACGATTA A
|
Protein sequence | MAYSVLVVDD EAVIRARLKG YFEKEGYRVV EAADGEQMWY EFNRQHIDLI MLDINLPGVD GLSLTRELRS RSHVGIILVS GRDESIDKIV GLEMGADDYV TKPFELRELL VRVKNLLWRI SLVKQAELAV AEELSQPDDV ISFEGYQLEL NSRKLRHGDA LIKLTKAEFE LLAAFALHPQ QVLSRERLMQ QTSHRNLDVN DRTIDVIIRR LRNKLDTELF VTIHGEGYLF AAKVDD
|
| |