Gene Shew185_3212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3212 
Symbol 
ID5373649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3831721 
End bp3832899 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content50% 
IMG OID640831463 
Producttrimethylamine-N-oxide reductase c-type cytochrome TorC 
Protein accessionYP_001367403 
Protein GI153001722 
COG category[C] Energy production and conversion 
COG ID[COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit 
TIGRFAM ID[TIGR02162] trimethylamine-N-oxide reductase c-type cytochrome TorC 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTGGT TAACCAACCT CTGGCGCACA CTGAACAAAC CCACCAAAGC GCTCACCTTA 
GGCGCCGTCA GCATCAGCGC TTTTATCATG GGTATCATCT TCTGGGGCGG ATTTAACACT
GCACTCGAAG CCACCAATAC CGAAGCTTTT TGTATTAGCT GCCACAGTAT GGAAAGCAAA
CCCTACCAAG AGCTGCAGGA AACTGTGCAT TGGTCGAATC ACTCTGGCGT TCGCGCCACC
TGCCCCGATT GCCACGTGCC CCATAATTGG AGCCGTAAAA TCGCCCGTAA GATGGAAGCC
TCGCACGACG TCTGGGGCTG GTTATTTAAC ACAGTCAACA CCCCTGAAAA ATTCGAAGCC
AAACGCTTAG AAATGGCGAG CCGTGAATGG AAACGTTTCG ACCGCGACAA CTCCTTAGCC
TGCAAAAACT GCCACAACTA CAACTCGATG AAATGGGAAG CCATGTCACC GCTGGCACAA
AAACAGATGA AACGCGCCGC AGAAATCGAC CAAAGCTGTA TCGATTGCCA TAAAGGTATT
GCTCACCATT TACCGGAAAT GGGCACTGCC CGCGCACCAG AACTGATTGC AGAAGTCGGA
TCAGGTGTTA GCTCAGTTGA AACGAATCAA ACTTACTATA GCGCCCTGAC TAAACCCTTA
TTCTTCACTG ATAAAGGCGA TGTGGAAGCA GGCACACTCA ACGTAGCAAC GAAAGTCAAT
GTGCTCGAAA CCCAAGGCAA ACGCATCAAG ATCGGCATCG ATGGCTGGCG TAAAAAGATT
GGTGCTGGCC GCGTGATCTA CATGGACTTT GGCGTGAACA TTCTGTCGGC ACAGTTAACC
AAAGACGCAG CCGAAACCGA AGGTGTTATC CAAACCTTTG AAGAAAAAGA AGATCCTATG
ACAGGCCTTA AATGGCAGCG TATCGAAGCA CAAATCTGGA CCGATAAGGA TTATCTGCTG
ACCGAGCTGC AACCACTTTG GGGTTATGCC CGCGATACCT TCCGCTCCAG CTGCAGTGTT
TGCCATACCC AACCCGATGA GGCGCACTTT GACGCCAATA CTTGGCCGGG AATGTTCCAA
GGCATGTTGG CCTTCGTGAA TATGGACCAA GACACCCAAG CACTAGTGCA GAAATATCTG
CAGGAACATT CGTCAACTTT TGTGAAAAAA GAGCACTAA
 
Protein sequence
MKWLTNLWRT LNKPTKALTL GAVSISAFIM GIIFWGGFNT ALEATNTEAF CISCHSMESK 
PYQELQETVH WSNHSGVRAT CPDCHVPHNW SRKIARKMEA SHDVWGWLFN TVNTPEKFEA
KRLEMASREW KRFDRDNSLA CKNCHNYNSM KWEAMSPLAQ KQMKRAAEID QSCIDCHKGI
AHHLPEMGTA RAPELIAEVG SGVSSVETNQ TYYSALTKPL FFTDKGDVEA GTLNVATKVN
VLETQGKRIK IGIDGWRKKI GAGRVIYMDF GVNILSAQLT KDAAETEGVI QTFEEKEDPM
TGLKWQRIEA QIWTDKDYLL TELQPLWGYA RDTFRSSCSV CHTQPDEAHF DANTWPGMFQ
GMLAFVNMDQ DTQALVQKYL QEHSSTFVKK EH