Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3212 |
Symbol | |
ID | 5373649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 3831721 |
End bp | 3832899 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640831463 |
Product | trimethylamine-N-oxide reductase c-type cytochrome TorC |
Protein accession | YP_001367403 |
Protein GI | 153001722 |
COG category | [C] Energy production and conversion |
COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
TIGRFAM ID | [TIGR02162] trimethylamine-N-oxide reductase c-type cytochrome TorC |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTGGT TAACCAACCT CTGGCGCACA CTGAACAAAC CCACCAAAGC GCTCACCTTA GGCGCCGTCA GCATCAGCGC TTTTATCATG GGTATCATCT TCTGGGGCGG ATTTAACACT GCACTCGAAG CCACCAATAC CGAAGCTTTT TGTATTAGCT GCCACAGTAT GGAAAGCAAA CCCTACCAAG AGCTGCAGGA AACTGTGCAT TGGTCGAATC ACTCTGGCGT TCGCGCCACC TGCCCCGATT GCCACGTGCC CCATAATTGG AGCCGTAAAA TCGCCCGTAA GATGGAAGCC TCGCACGACG TCTGGGGCTG GTTATTTAAC ACAGTCAACA CCCCTGAAAA ATTCGAAGCC AAACGCTTAG AAATGGCGAG CCGTGAATGG AAACGTTTCG ACCGCGACAA CTCCTTAGCC TGCAAAAACT GCCACAACTA CAACTCGATG AAATGGGAAG CCATGTCACC GCTGGCACAA AAACAGATGA AACGCGCCGC AGAAATCGAC CAAAGCTGTA TCGATTGCCA TAAAGGTATT GCTCACCATT TACCGGAAAT GGGCACTGCC CGCGCACCAG AACTGATTGC AGAAGTCGGA TCAGGTGTTA GCTCAGTTGA AACGAATCAA ACTTACTATA GCGCCCTGAC TAAACCCTTA TTCTTCACTG ATAAAGGCGA TGTGGAAGCA GGCACACTCA ACGTAGCAAC GAAAGTCAAT GTGCTCGAAA CCCAAGGCAA ACGCATCAAG ATCGGCATCG ATGGCTGGCG TAAAAAGATT GGTGCTGGCC GCGTGATCTA CATGGACTTT GGCGTGAACA TTCTGTCGGC ACAGTTAACC AAAGACGCAG CCGAAACCGA AGGTGTTATC CAAACCTTTG AAGAAAAAGA AGATCCTATG ACAGGCCTTA AATGGCAGCG TATCGAAGCA CAAATCTGGA CCGATAAGGA TTATCTGCTG ACCGAGCTGC AACCACTTTG GGGTTATGCC CGCGATACCT TCCGCTCCAG CTGCAGTGTT TGCCATACCC AACCCGATGA GGCGCACTTT GACGCCAATA CTTGGCCGGG AATGTTCCAA GGCATGTTGG CCTTCGTGAA TATGGACCAA GACACCCAAG CACTAGTGCA GAAATATCTG CAGGAACATT CGTCAACTTT TGTGAAAAAA GAGCACTAA
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Protein sequence | MKWLTNLWRT LNKPTKALTL GAVSISAFIM GIIFWGGFNT ALEATNTEAF CISCHSMESK PYQELQETVH WSNHSGVRAT CPDCHVPHNW SRKIARKMEA SHDVWGWLFN TVNTPEKFEA KRLEMASREW KRFDRDNSLA CKNCHNYNSM KWEAMSPLAQ KQMKRAAEID QSCIDCHKGI AHHLPEMGTA RAPELIAEVG SGVSSVETNQ TYYSALTKPL FFTDKGDVEA GTLNVATKVN VLETQGKRIK IGIDGWRKKI GAGRVIYMDF GVNILSAQLT KDAAETEGVI QTFEEKEDPM TGLKWQRIEA QIWTDKDYLL TELQPLWGYA RDTFRSSCSV CHTQPDEAHF DANTWPGMFQ GMLAFVNMDQ DTQALVQKYL QEHSSTFVKK EH
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