Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3197 |
Symbol | |
ID | 5371936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 3814692 |
End bp | 3815585 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640831450 |
Product | peptidase U32 |
Protein accession | YP_001367390 |
Protein GI | 153001709 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCATATTT CCCTAGGCCC GCTGTTGTAT TGCTGGCAAA AACAACAGGT CACTGATTTT TATCAGCAAG TCTCCGCCAG TCAAATTCCC TTAGTGTATT TAGGAGAGGC CGTCTGCAGT CGCAGACGCG AACTCAAATG GGGCGATTAT CTAGAGCTGG CGCAAATGCT CAAGCAGGCG GGTAAAGAAG TCGTGATTTC AACGCTGGCA TTAATCGAAG CGCCATCGGA ATACACTGAG CTGAAACGCC AAGTCGATAA CGGCGAATTT ATGGTCGAAG CGAACGATAT GGCAGCTGTC TATCTCGCCA ACGAGCACAA GCTGCCCTTC GTCTGCGGCG CGAGTATCAA TAACTACAAT CGCGCCAGTT TAGACATTTT GCAGCGATTT GGCATGCAAA GGTTTGTGAT GCCAGTGGAG CTATCAAAGG CTTGGCTTAG CCAAGTGATC CAACAAAAGC CGTCTTTTGA AGTGGAGGTG CTCGGCCACG GCTATTTGCC CCTCGCCCAT TCGGCGCGCT GCTTTACCGC TAGGCACAAA CAGCTCACCA AAGATCATTG TGAAACGGTG TGCCGTGAAT ACAGTAAAGG ACTTGTCGCG CAAACCCAAG AGCAGCAGCC TTTGCTCAGA CTTAATGGGA TCCAAACTCA ATCCGCCAGT TGTTTAGATT TACGCAGTGA AATAACAACC ATGGTAAAGA TGGGGGTGGA TGTGTTTCGG GTATCACCCA GTAGCCTTGA CTGCATCGCC ACCGCCAATG CCTTGGTCGA TGCAATTAAC ACGCCTGAAA ATGCTCAAGA CTTCTCGATT GGCAGCGATG CGAACCTAGA GAGAACCCAG TGTAACGGCT ATTGGTTTGG AGAAGCAGGC CTTGCTGTGC ATGCCAATCC CTAG
|
Protein sequence | MHISLGPLLY CWQKQQVTDF YQQVSASQIP LVYLGEAVCS RRRELKWGDY LELAQMLKQA GKEVVISTLA LIEAPSEYTE LKRQVDNGEF MVEANDMAAV YLANEHKLPF VCGASINNYN RASLDILQRF GMQRFVMPVE LSKAWLSQVI QQKPSFEVEV LGHGYLPLAH SARCFTARHK QLTKDHCETV CREYSKGLVA QTQEQQPLLR LNGIQTQSAS CLDLRSEITT MVKMGVDVFR VSPSSLDCIA TANALVDAIN TPENAQDFSI GSDANLERTQ CNGYWFGEAG LAVHANP
|
| |