Gene Shew185_3182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3182 
Symbol 
ID5370772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp3798094 
End bp3798717 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content51% 
IMG OID640831435 
ProductTetR family transcriptional regulator 
Protein accessionYP_001367375 
Protein GI153001694 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTCAA CCGTCACCCA GACGCCCTGT GTAGGTCGCC CACGTGCCTT CGACACTGAC 
GATGCATTAG CCAAAGCCTT AGAAGTCTTC TGGCGCAAAG GTTTTGAAGG TACATCGTTA 
ACCGATTTAA CCCAAGCTAT GGGCATTAAT AAGCCAAGCC TTTATGCCGC CTTCGGCAAT 
AAAGAACAGT TATTTCTCAA AGCGATAGAA TTATATGAAC AACGCCCCTG TGCGTTTTTC 
TATCCCGCGC TGGAGCAGAA AACCGCCTAT CTAGTGGTCG AGTCAATGCT GCTCGGGGCC 
GCGAGCTCCT TGGTGGATAA AAGCCATCCG CAGGGATGTT TGATTGTTCA AGGGGCATTA 
ACCTGCAGTG AAGCTGGGCA AGCGATTAAA GACACTTTGA TTAATCGTCG CCGCGACGGT 
GAAATCGCTC TGTGCGAAAG ATTGCAACGC GCCAAAGATG AAGGGGATTT GCCCGCAGAT 
GCCGAGCCGT TACTGCTTGC CCGTTATGTC GGCACAGTAT TGCAAGGCAT GGCCGTACAA 
GCGACCAGTG GGATTTGCCC GAATGAATTA CGCAAAGTCG CCGAGCTAGT GCTCGCTAAC 
TTTCCGCGCA ATGATGAGTC CTGA
 
Protein sequence
MMSTVTQTPC VGRPRAFDTD DALAKALEVF WRKGFEGTSL TDLTQAMGIN KPSLYAAFGN 
KEQLFLKAIE LYEQRPCAFF YPALEQKTAY LVVESMLLGA ASSLVDKSHP QGCLIVQGAL 
TCSEAGQAIK DTLINRRRDG EIALCERLQR AKDEGDLPAD AEPLLLARYV GTVLQGMAVQ 
ATSGICPNEL RKVAELVLAN FPRNDES