Gene Shew185_3174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3174 
Symbol 
ID5370934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3786597 
End bp3787460 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content47% 
IMG OID640831427 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_001367367 
Protein GI153001686 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCCCA AATACACCAG TTTTGATAAA TCTGCTAAAA CCTGTCTTCG CAAACAAGTG 
ATTACGGAGG ATTTATCTTG GGCCCATTAT CAAAATGCGG GCGAGCGTTT GTATTACCAA
AACGACACAC AACACACGCT GAGCATGTAT CTGGATGGCG GCTACGAAAC CCACAGAACC
GATATCAAAG CCGACTATGG TGCGCCCAGC AAGTTTTGCC TTATGCCCCA AGGCTGCCAA
AGCCATTGGC AACTGGGACA ACCGCAGCAG TTTATGCATT TGTATTTTAG CGATGAACAT
CTGAAGAAAC TGGCCGTGCG GGTCTTTGAT AAAGATCCAC GCCAAGTGCG TTTACCTGAG
CTGACCTTTG TCGACAATCC GAGGTTAGAG GCGCTATTTA GGCATCAAGT TGCCGGGCTC
AATTGGCAGA CCAGTGATAA CCATCTAATG ATGGAACAGG TAACCGACAC TGTGCTGGTG
ACGTTACTGC AAAGTTCCGG CTTTAATTTG TCGGTGGGGC CAATCAAGGG CGGGCTAGCA
CCTAAAGTGG CTAAAGCGAT CAAAGAGTTT ATTTATTGCC ATTCACATCG GCAGATTTAC
TTGTCTGAAC TGGCCGAGAT TGCTCAGCTT AGCGAGTACC ATTTTTGCCG CATGTTTAAA
TGCCAATTTG CGATGACGCC GCAGGAATAT TTGCTACAAG TGCGCATCGA AAAGGTCAAA
CAAAGCTTGA GTCATTCAAC GCAATCCTTG ACCGATATCG CCCTCAATAA TGGCTTCGCT
AATCAAAGCC ATATGGGCCG TTACTTTAAA AAACTCAGCG GCATGTCACC GGGCGAATAT
CAAAAACATC ATCAAGGCCG CTAG
 
Protein sequence
MEPKYTSFDK SAKTCLRKQV ITEDLSWAHY QNAGERLYYQ NDTQHTLSMY LDGGYETHRT 
DIKADYGAPS KFCLMPQGCQ SHWQLGQPQQ FMHLYFSDEH LKKLAVRVFD KDPRQVRLPE
LTFVDNPRLE ALFRHQVAGL NWQTSDNHLM MEQVTDTVLV TLLQSSGFNL SVGPIKGGLA
PKVAKAIKEF IYCHSHRQIY LSELAEIAQL SEYHFCRMFK CQFAMTPQEY LLQVRIEKVK
QSLSHSTQSL TDIALNNGFA NQSHMGRYFK KLSGMSPGEY QKHHQGR