Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3162 |
Symbol | |
ID | 5373023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 3770769 |
End bp | 3772436 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640831415 |
Product | putative ABC transporter ATP-binding protein |
Protein accession | YP_001367355 |
Protein GI | 153001674 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.322679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCAGT TTGTTTACAG CATGCTGCGG GTGGGTAAAA TTGTTCCGCC TAAGAAGCAG ATCCTTAAAG ATATTTCTTT AAGCTTTTTC CCCGGCGCCA AAATTGGCGT ACTCGGCCTC AACGGTTCAG GTAAGTCGAC ACTACTGCGC ATTATGGCGG GTATCGATAC CGAAATTGAA GGCGAAGCGC GCCCAATGCC GGGATTGAAA ATCGGTTACC TACCGCAGGA ACCTAAACTC GATCCGAATC AAACCGTGCG TGAAGCAATT GAAGAAGCGG TAGCAGAGGC AAAAAATGCC CTGACTCGCC TCGATGCCGT TTATGCTGCC TACGCCGAGC CGGATGCCGA TTTCGACGCC CTTGCGAAAG AGCAAGGCGA ACTCGAAGCG ATTATCCAAG CCCAAGATGC CCATAACTTA GAGTACGTCC TTGAGCGCGC CGCTAACGCC CTGCGTCTGC CGGATTGGGA TGAAAAAATC GAAGTATTAT CCGGTGGTGA ACGTCGCCGT GTGGCGATTT GTCGCTTGCT GCTTGAAAAA CCAGAAATGC TGTTACTCGA CGAACCCACC AACCACTTGG ATGCTGAATC TGTGGCGTGG CTTGAGCACT TCTTGCAGGA ATATGCCGGT ACTGTGGTCG CGATTACCCA TGACAGATAC TTCCTCGACA ATGCCGCTGG CTGGATTTTA GAACTCGACC GCGGTGAAGG TATTCCGTGG GAAGGTAACT ATTCTTCATG GCTTGAGCAG AAAGATGCCC GTCTGAAGCA AGAATCGGCT ACCGAAAGCG CTCGCCAAAA GACCATTGCC AAGGAATTGG AATGGGTACG CCAAGGCGCC AAAGGCCGTC AGTCTAAAGG CAAGGCCCGT ATGGCGCGCT TTGAAGAACT GAACACTAAC GATTACCAAA AACGTAACGA AACCAACGAG CTGTTTATTC CGCCAGGACC ACGTTTAGGC GACAAGGTTA TTGAAGTGAA TAACCTGACC AAATCTTACG GTGACCGCGT ACTCATCGAC AATCTGTCGT TCTCTGTACC TAAGGGCGCT ATCGTCGGTA TTATCGGTGC CAACGGCGCG GGTAAATCAA CCCTGTTCCG CATGTTATCC GGCGCTGAAA CGCCAGACAG CGGCAGTATT GAGCTGGGTG ATACTGTGCA ACTGGCATCG GTTGAGCAGT TCCGCGATTC AATGAATGAT AAAAACACCA TTTGGGAAGA AATCTCCGGT GGTCAAGACA TCATGCGTAT CAACAACATG GAAATCCCGA GCCGCGCTTA TGTAGGCCGC TTCAACTTCC GTGGTGGCGA TCAGCAAAAA GTCATCGGCA CCTTGTCGGG TGGTGAACGT AACCGAGTAC ATTTAGCCAA ACTGCTGCAA GCGGGCGGTA ACGTGTTATT ACTCGACGAA CCCACCAACG ACTTAGACGT TGAAACCCTG CGCGCACTGG AAGAAGCGAT TCTGGAATTC CCAGGTTGCG CTATGGTGAT TTCGCATGAC CGTTGGTTCC TCGACCGTAT CGCGACCCAC ATTCTGGATT ACCGTGACGA AGGCCAAGTG AACTTCTACG AAGGTAACTA CACAGAATAC TCAGCATGGT TGAAAAACAC CTATGGCGCC GATGTGGTTG AGCCACACCG CTTGAAATAC AAGCGCATGA TTAAGTAG
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Protein sequence | MAQFVYSMLR VGKIVPPKKQ ILKDISLSFF PGAKIGVLGL NGSGKSTLLR IMAGIDTEIE GEARPMPGLK IGYLPQEPKL DPNQTVREAI EEAVAEAKNA LTRLDAVYAA YAEPDADFDA LAKEQGELEA IIQAQDAHNL EYVLERAANA LRLPDWDEKI EVLSGGERRR VAICRLLLEK PEMLLLDEPT NHLDAESVAW LEHFLQEYAG TVVAITHDRY FLDNAAGWIL ELDRGEGIPW EGNYSSWLEQ KDARLKQESA TESARQKTIA KELEWVRQGA KGRQSKGKAR MARFEELNTN DYQKRNETNE LFIPPGPRLG DKVIEVNNLT KSYGDRVLID NLSFSVPKGA IVGIIGANGA GKSTLFRMLS GAETPDSGSI ELGDTVQLAS VEQFRDSMND KNTIWEEISG GQDIMRINNM EIPSRAYVGR FNFRGGDQQK VIGTLSGGER NRVHLAKLLQ AGGNVLLLDE PTNDLDVETL RALEEAILEF PGCAMVISHD RWFLDRIATH ILDYRDEGQV NFYEGNYTEY SAWLKNTYGA DVVEPHRLKY KRMIK
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