Gene Shew185_3162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3162 
Symbol 
ID5373023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3770769 
End bp3772436 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content51% 
IMG OID640831415 
Productputative ABC transporter ATP-binding protein 
Protein accessionYP_001367355 
Protein GI153001674 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.322679 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAGT TTGTTTACAG CATGCTGCGG GTGGGTAAAA TTGTTCCGCC TAAGAAGCAG 
ATCCTTAAAG ATATTTCTTT AAGCTTTTTC CCCGGCGCCA AAATTGGCGT ACTCGGCCTC
AACGGTTCAG GTAAGTCGAC ACTACTGCGC ATTATGGCGG GTATCGATAC CGAAATTGAA
GGCGAAGCGC GCCCAATGCC GGGATTGAAA ATCGGTTACC TACCGCAGGA ACCTAAACTC
GATCCGAATC AAACCGTGCG TGAAGCAATT GAAGAAGCGG TAGCAGAGGC AAAAAATGCC
CTGACTCGCC TCGATGCCGT TTATGCTGCC TACGCCGAGC CGGATGCCGA TTTCGACGCC
CTTGCGAAAG AGCAAGGCGA ACTCGAAGCG ATTATCCAAG CCCAAGATGC CCATAACTTA
GAGTACGTCC TTGAGCGCGC CGCTAACGCC CTGCGTCTGC CGGATTGGGA TGAAAAAATC
GAAGTATTAT CCGGTGGTGA ACGTCGCCGT GTGGCGATTT GTCGCTTGCT GCTTGAAAAA
CCAGAAATGC TGTTACTCGA CGAACCCACC AACCACTTGG ATGCTGAATC TGTGGCGTGG
CTTGAGCACT TCTTGCAGGA ATATGCCGGT ACTGTGGTCG CGATTACCCA TGACAGATAC
TTCCTCGACA ATGCCGCTGG CTGGATTTTA GAACTCGACC GCGGTGAAGG TATTCCGTGG
GAAGGTAACT ATTCTTCATG GCTTGAGCAG AAAGATGCCC GTCTGAAGCA AGAATCGGCT
ACCGAAAGCG CTCGCCAAAA GACCATTGCC AAGGAATTGG AATGGGTACG CCAAGGCGCC
AAAGGCCGTC AGTCTAAAGG CAAGGCCCGT ATGGCGCGCT TTGAAGAACT GAACACTAAC
GATTACCAAA AACGTAACGA AACCAACGAG CTGTTTATTC CGCCAGGACC ACGTTTAGGC
GACAAGGTTA TTGAAGTGAA TAACCTGACC AAATCTTACG GTGACCGCGT ACTCATCGAC
AATCTGTCGT TCTCTGTACC TAAGGGCGCT ATCGTCGGTA TTATCGGTGC CAACGGCGCG
GGTAAATCAA CCCTGTTCCG CATGTTATCC GGCGCTGAAA CGCCAGACAG CGGCAGTATT
GAGCTGGGTG ATACTGTGCA ACTGGCATCG GTTGAGCAGT TCCGCGATTC AATGAATGAT
AAAAACACCA TTTGGGAAGA AATCTCCGGT GGTCAAGACA TCATGCGTAT CAACAACATG
GAAATCCCGA GCCGCGCTTA TGTAGGCCGC TTCAACTTCC GTGGTGGCGA TCAGCAAAAA
GTCATCGGCA CCTTGTCGGG TGGTGAACGT AACCGAGTAC ATTTAGCCAA ACTGCTGCAA
GCGGGCGGTA ACGTGTTATT ACTCGACGAA CCCACCAACG ACTTAGACGT TGAAACCCTG
CGCGCACTGG AAGAAGCGAT TCTGGAATTC CCAGGTTGCG CTATGGTGAT TTCGCATGAC
CGTTGGTTCC TCGACCGTAT CGCGACCCAC ATTCTGGATT ACCGTGACGA AGGCCAAGTG
AACTTCTACG AAGGTAACTA CACAGAATAC TCAGCATGGT TGAAAAACAC CTATGGCGCC
GATGTGGTTG AGCCACACCG CTTGAAATAC AAGCGCATGA TTAAGTAG
 
Protein sequence
MAQFVYSMLR VGKIVPPKKQ ILKDISLSFF PGAKIGVLGL NGSGKSTLLR IMAGIDTEIE 
GEARPMPGLK IGYLPQEPKL DPNQTVREAI EEAVAEAKNA LTRLDAVYAA YAEPDADFDA
LAKEQGELEA IIQAQDAHNL EYVLERAANA LRLPDWDEKI EVLSGGERRR VAICRLLLEK
PEMLLLDEPT NHLDAESVAW LEHFLQEYAG TVVAITHDRY FLDNAAGWIL ELDRGEGIPW
EGNYSSWLEQ KDARLKQESA TESARQKTIA KELEWVRQGA KGRQSKGKAR MARFEELNTN
DYQKRNETNE LFIPPGPRLG DKVIEVNNLT KSYGDRVLID NLSFSVPKGA IVGIIGANGA
GKSTLFRMLS GAETPDSGSI ELGDTVQLAS VEQFRDSMND KNTIWEEISG GQDIMRINNM
EIPSRAYVGR FNFRGGDQQK VIGTLSGGER NRVHLAKLLQ AGGNVLLLDE PTNDLDVETL
RALEEAILEF PGCAMVISHD RWFLDRIATH ILDYRDEGQV NFYEGNYTEY SAWLKNTYGA
DVVEPHRLKY KRMIK