Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3134 |
Symbol | ispD |
ID | 5371019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3737169 |
End bp | 3737960 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640831388 |
Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
Protein accession | YP_001367328 |
Protein GI | 153001647 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.251899 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAGAGC TAGGACATTT AGATCTTGGA TTAAGCGAAC AATCCAATCC AGGCAGTCAA TCTGAGCCGG TAATGCAAAC TGAATTGCAG CGCCAAGCTG AGCATATCAC TCAAGCTGTG GTGGCTATCG TTCCCGCTGC GGGCATTGGT AGCCGCATGG GCGCCGACAG ACCTAAACAA TATCTTGAAG TGTGCGGCCA GAGTATTCTC GGCCATACTT TAGATAAGCT GTTGTCTCAC CCGCACATTT CCCACGTCAT CGTCGCCTTA CATCCGAATG ATACTATTTT CAATACCCTG CCACAGGCCG CGCATCCTAA ATTGACCACA GTATTAGGTG GCGGTGAGCG CGCTGATTCT GTGTTGGCGG CGCTGCAAAT TGCGCCCGAG CACAGTTGGG CATTAGTGCA TGATGCGGCA AGACCTTGTT TAACCGCGAC GGATATCGAC AAGTTACTCG CATCCAGAGT GCAATTTCCC CAAGGCGCGA TTTTGGCCAT GCCAGTGCGC GATACCATGA AGCGCGCCAA TAAACTGGGC GAAATCAGCG CTACTGTGTG CCGCGATAAT TTATGGCATG CATTAACGCC GCAGTTATTT CAGGCAGCGC AACTAAAAGA TTACCTCAAT GCCGCTCTGG CGGCAGGTGC GGTAGTGACA GATGAGGCTT CGGCGATGGA ATGGGCGGGC ATTTCACCTG GACTCGTTTC GGGCCGTGCT GACAATATAA AAGTGACGCA TCCCGATGAT TTGGGATTGG CCGAATTGTT TTTAATGCGT GCCGCAAAAT AA
|
Protein sequence | MSELGHLDLG LSEQSNPGSQ SEPVMQTELQ RQAEHITQAV VAIVPAAGIG SRMGADRPKQ YLEVCGQSIL GHTLDKLLSH PHISHVIVAL HPNDTIFNTL PQAAHPKLTT VLGGGERADS VLAALQIAPE HSWALVHDAA RPCLTATDID KLLASRVQFP QGAILAMPVR DTMKRANKLG EISATVCRDN LWHALTPQLF QAAQLKDYLN AALAAGAVVT DEASAMEWAG ISPGLVSGRA DNIKVTHPDD LGLAELFLMR AAK
|
| |