| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3129 |
|---|
| Symbol | |
|---|
| ID | 5372026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 3733117 |
|---|
| End bp | 3734013 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640831383 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_001367323 |
|---|
| Protein GI | 153001642 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.365869 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTGAATG CGGGTTTAGT CTTAAACCTC TGCTTTATAT TTCTGCTTGC AGGCTGTAGC
TTTCAGGCTA GCCGACCCGC GCCCGTCGAA AATATTTCCC ATAGCTACTC TAAAAACAAC
AAAGGCCACA TTAAATCGAA TTCATATAAA GTTAAGAAAG GGGACACGCT TTACTCTATT
TCTTGGGGAG CAGGAAAGGA TTTTTCTGAA ATAGCTAAAC TTAATCAGTT AGATAACCCT
TATACAATTT ACCCGGGACA GATTTTATAT TTAACGAATG CTAAGTCGAG TAGTCAGTCC
AAATCTACAA CTTTAGATGG AAGGAAAACG AGCTCCTCGA GTAATAATTC TAGTAAAAAT
GATAAAAAAC AAACAGATAA TCAAGTTTCT CAAACCGGCG CTAAGTCAAG TAATGATCTG
AAAAAAACAC TTGATCAGAA AGCTAAGCCC GCGTACCTTG TAACAAGTTC CCAACAAAAT
GTTAACTCGA TCATGGTTCC ACCGACTTCG ACACTACCAA CCAGTGTGAG TCAGTGGGAG
TGGCCAGTAA GAGGGAAGTT AATCGGGACT TACTCTGCCA ATGAGCAGGG AAATAAAGGC
ATTAAGATCG CGGGGAATCG GGGAGATATC ATCAAAGCTG CTGCAGATGG GCGGGTGGTA
TACGCAGGAA GTGCTCTTAG GGGTTACGGT AATTTAGTGA TTATTAAACA TAGTGACGAT
TACCTTAGTG CTTATGCTCA TACGGACAAG ATCTTAGTCA AAGAAAAGCA ACATGTCCTC
GCAGGGCAGA CAGTTGCAAA AATGGGCAGT ACAGGTGCCA ATCGGGTAAT GTTACATTTT
GAAATTCGTT ACCATGGACA GTCTGTAAAC CCACTTACTT ATTTACCCAA ACAATGA
|
|---|
| Protein sequence | MLNAGLVLNL CFIFLLAGCS FQASRPAPVE NISHSYSKNN KGHIKSNSYK VKKGDTLYSI
SWGAGKDFSE IAKLNQLDNP YTIYPGQILY LTNAKSSSQS KSTTLDGRKT SSSSNNSSKN
DKKQTDNQVS QTGAKSSNDL KKTLDQKAKP AYLVTSSQQN VNSIMVPPTS TLPTSVSQWE
WPVRGKLIGT YSANEQGNKG IKIAGNRGDI IKAAADGRVV YAGSALRGYG NLVIIKHSDD
YLSAYAHTDK ILVKEKQHVL AGQTVAKMGS TGANRVMLHF EIRYHGQSVN PLTYLPKQ
|
|---|
| |