Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3098 |
Symbol | |
ID | 5370207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 3693054 |
End bp | 3694355 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640831344 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001367292 |
Protein GI | 153001611 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.872049 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGATTTG AATCTTTTAG TTTTTCCCCC GAGATTTTGC GCGCTATCTC AGATTGCGGT TATCAACAAA TGACGCCTAT TCAGCAGCAA GCGATACCTG CTATCCGCCG CGGCCAAGAT GTCTTAGCCA GTGCCCAAAC CGGTACGGGT AAAACCGCCG CTTTCGCGCT GCCGATCCTG CAAAAGATGG TTGAAAATCC AAGCGAAACG TTAAAGTCGA ATGCCCGCGT ATTAATCCTT ACGCCGACCC GTGAGCTTGC GGCTCAAGTG GCTGACAACG TTACGGCTTA CTGCAAATAC TTAAACTTCA GCGTGTTAAC CATTTATGGC GGCGTAAAGA TAGAAACACA AGCGCAAAAG CTGAAACGCG GCGCCGATGT GATTGTTGCC ACCCCAGGTC GCTTACTTGA GCACCTTACC GCCTGTAACT TAAGCCTGTC GAACGTCGAC TTTTTAGTCC TAGACGAAGC CGACCGTATG TTAGACATGG GCTTTAGCGC CGATATCCAA AAGATCCTGC AAGCGGTAAA TAAGAAGCGT CAAAACCTGT TGTTCTCGGC CACTTTCTCA AGTGCGGTGA AAAAACTCGC CAACGACATG ATGGTTAAAC CACAAGTGAT CAGCGTTGAT AAGCAAAACA CTACGGCTGA TACGGTTAGC CAAGTGGTTT ATCCGGTTGA ACAACGCCGT AAACGTGAAC TGCTGTCTGA GCTAATTGGC AAGAAAAACT GGCAACAGGT ATTGGTATTT ACCGCGACCC GTGATGCCGC CGATACGCTA GTCAAAGAAT TGAATTTAGA TGGGATCCCA TCTGAAGTGG TCCACGGTGA TAAAGGCCAA GGCAGTCGTC GCCGCGCCCT GCGTGAGTTT GTTGCAGGTG ATGTACGCGT ACTGGTTGCC ACCGAAGTTG CCGCCCGTGG TCTGGATATC CCAAGCCTTG AATACGTAGT CAACTATGAC TTACCTTTCC TCGCCGAAGA CTATGTCCAC CGTATCGGTC GTACAGGCCG TGCGGGTAAA ACTGGCGTAG CCATTTCATT TGTGAGCCGC GAAGAAGAAC GTACCTTAGC CGATATCGAA AAACTGATCG GTCAACAAAT TCGCCGCGTC ACTGTACCAG GTTATGAAGT AGGCAGCCGC GAATTGCTAT TAAAGCAATT GCAAACCCGC CGTAGCTTTG CCAAGAAGCA ACAAAGAACC GACAACGTTG GCGCTCAAGT TACTGCTGAG AAAAACATGC AAGGCCGCCG CGTAAAAATG AAGGTGGGTC AAGCACCGAG CAAAGCGAAA AAACTTAAGT AA
|
Protein sequence | MRFESFSFSP EILRAISDCG YQQMTPIQQQ AIPAIRRGQD VLASAQTGTG KTAAFALPIL QKMVENPSET LKSNARVLIL TPTRELAAQV ADNVTAYCKY LNFSVLTIYG GVKIETQAQK LKRGADVIVA TPGRLLEHLT ACNLSLSNVD FLVLDEADRM LDMGFSADIQ KILQAVNKKR QNLLFSATFS SAVKKLANDM MVKPQVISVD KQNTTADTVS QVVYPVEQRR KRELLSELIG KKNWQQVLVF TATRDAADTL VKELNLDGIP SEVVHGDKGQ GSRRRALREF VAGDVRVLVA TEVAARGLDI PSLEYVVNYD LPFLAEDYVH RIGRTGRAGK TGVAISFVSR EEERTLADIE KLIGQQIRRV TVPGYEVGSR ELLLKQLQTR RSFAKKQQRT DNVGAQVTAE KNMQGRRVKM KVGQAPSKAK KLK
|
| |