| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3092 |
|---|
| Symbol | |
|---|
| ID | 5370699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 3682317 |
|---|
| End bp | 3682787 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640831338 |
|---|
| Product | peptidylprolyl isomerase FKBP-type |
|---|
| Protein accession | YP_001367286 |
|---|
| Protein GI | 153001605 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATGT TACTTGCCGT TGCTGTGATT GCTGGGGTGA TTTTTTACTT CTTTACCTCG
ATGAACGGCC AAAAAGCCGC CCAAGAGAAT ATCCGTTTAG GCAATGAATT TTTAACACAA
AACAAAACCA AAGAAGGTGT TATCACCACA GCTTCGGGTT TGCAATATCA AGTGTTAACT
AAGGGCGATG GCGCCGTTCA TCCTAAAGCC AGCGATACAG TGACAGTGCA TTACCATGGC
ACTTTGATCG ACGGTACTGT GTTTGATAGT TCAGTTGATC GCGGTGAGCC TATCGCATTT
CCGCTTAATC GAGTGATTAA AGGTTGGACC GAGGGCGTAC AACTTATGGT TGTTGGCGAT
AAAGTGCGTT TCTTTATCCC AAGTGAACTC GCCTACGGCA ACAGCAGCAC GGGCAAGATT
GGCGGTGGTT CAGTGCTCAT TTTTGATGTA GAACTGCTTA AGATTAATTA A
|
|---|
| Protein sequence | MKMLLAVAVI AGVIFYFFTS MNGQKAAQEN IRLGNEFLTQ NKTKEGVITT ASGLQYQVLT
KGDGAVHPKA SDTVTVHYHG TLIDGTVFDS SVDRGEPIAF PLNRVIKGWT EGVQLMVVGD
KVRFFIPSEL AYGNSSTGKI GGGSVLIFDV ELLKIN
|
|---|
| |