Gene Shew185_3055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3055 
Symbol 
ID5373386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp3647840 
End bp3648415 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content47% 
IMG OID640831297 
Producthypothetical protein 
Protein accessionYP_001367249 
Protein GI153001568 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0011163 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGC AACTGTTAAG CGCACTGATT GGTGCATCTC TATTGGCTCC GATGGCGGCT 
TCAGCGGCGG ACTATGTCAT TGACCGTGAA GGAGCACATG CCTCTATTAC TTTCAAAGTG 
AGCCACTTAG GTTATAGCTA TGTCGTTGGC CGCTTTAATG ATTTTAGCGG CGACTTTAGC 
TATGACGCGG CTAAACCCAC TGCGGCTAAA GTGAATGTGA CTGTAAATAC GCTCAGTGTA 
GATTCAAACC ACGCCGAGCG TGATAAGCAT ATTCGTAGCG CCGATTTCCT AAACACGAGT 
AAGTTTGCGC AAGCAACGTT TACCTCAACC ACAGTTGAAG ATAAAGGTAA TGGAGACTTA 
GTGATTAACG GCAACTTAAC CTTAAATGGT GTCACTAAGC CATTAGCGAT CAATGCCCAT 
GCAGTGGGCG AAGGTCAAGA TCCTTGGGGT GGCTACCGTG CCGGTTTTAC TGGCACAACC 
ACGTTTGCGA TGAAAGATTT CGGTATCAAA ATGGATTTAG GCCCAGCATC AAGCCATGTT 
GAGTTAGATC TTGTGGTTGA AGGCGTGCGT AAGTAA
 
Protein sequence
MKKQLLSALI GASLLAPMAA SAADYVIDRE GAHASITFKV SHLGYSYVVG RFNDFSGDFS 
YDAAKPTAAK VNVTVNTLSV DSNHAERDKH IRSADFLNTS KFAQATFTST TVEDKGNGDL 
VINGNLTLNG VTKPLAINAH AVGEGQDPWG GYRAGFTGTT TFAMKDFGIK MDLGPASSHV 
ELDLVVEGVR K