| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3048 |
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| Symbol | |
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| ID | 5371738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3641775 |
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| End bp | 3642716 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640831290 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001367242 |
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| Protein GI | 153001561 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0118588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGAAC TGTTAGAACC TATTGCGATT TTTACTCATG TGGCCAGAGC TGGTAGTTTT
AGTGCCGCCG CAAGAAGGCT TGGGATCTCT AAGTCTAAGG TCAGTACACA AGTCGCCGAT
CTTGAACATA GACTTGGTGT TCAATTAATC CAACGTACCA CCCGTAGCTT AAGCCTGACT
GAAGCAGGGC ATTTGCTGTA TCTGCAAGGT GAAGAACTGC TGCGTGACGC TGAACAAGCG
ATAGCCAGCG TGCATAACTT AAATGATGCG ACCCGCGGTG TGCTCAAGGT GGGGATTTCC
CAATCCTTTG GGGTGATGCA TATCATTCCT GCGCTGCCAT CCTTTATGGC AAAACATCCT
GAGCTTGAGC TACAAGTGAG CTTACTGGAC CATAAAGTAG ATGTAGTGAG TGAAGGCTTA
GACTTACTGT TAACTATGTC GGAGCAATTA CCGCTTGGGA TGGTTGCTAG ACCTTTGATG
AAGTGCCAAT TCCTGTTAGT TGCTTCTCCT GGCTACATTG CTCAACATGG CGAGCCGACT
CGACCTGAGC AGTTAGTTGA CCACAATTGT TTGGTCTACC AAGGTGAGTG GCACGAGCAC
AGCATGTGGC AATTTAAGAA GGGTGATGAT TACTGTGAAA TTGGCGTATC GGGCAATTTC
AGGGTAGATA ACGCGCCAGC ATTAAAATCT GCTGCAATCA GTGGTCTTGG GGTTGTGTAT
CTTGCGAGTT ATCTGATGGA AGATGAGATT GCCAAGGGGA CATTAGTGCC TTTACTGAAG
GATTGGCAAT TGACCCACCA TCTGCCATTG CAGGCGGTTT ATCCCCGTCG TAAGCACTTA
GCACCTAAGG TCAGTTCTTT TATCGAATTC ATCAAAGATC ACATAGGAAC GCCGCCGTAT
TGGGATGCTC CCTATGTCGA ATTATTTAGT AAACGTCAGT AA
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| Protein sequence | MLELLEPIAI FTHVARAGSF SAAARRLGIS KSKVSTQVAD LEHRLGVQLI QRTTRSLSLT
EAGHLLYLQG EELLRDAEQA IASVHNLNDA TRGVLKVGIS QSFGVMHIIP ALPSFMAKHP
ELELQVSLLD HKVDVVSEGL DLLLTMSEQL PLGMVARPLM KCQFLLVASP GYIAQHGEPT
RPEQLVDHNC LVYQGEWHEH SMWQFKKGDD YCEIGVSGNF RVDNAPALKS AAISGLGVVY
LASYLMEDEI AKGTLVPLLK DWQLTHHLPL QAVYPRRKHL APKVSSFIEF IKDHIGTPPY
WDAPYVELFS KRQ
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