| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3002 |
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| Symbol | |
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| ID | 5373005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3598233 |
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| End bp | 3599420 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640831244 |
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| Product | outer membrane protein assembly complex subunit YfgL |
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| Protein accession | YP_001367196 |
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| Protein GI | 153001515 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1520] FOG: WD40-like repeat |
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| TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0839555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTCTT GGTGCAAAAA CCTGCTAGCC GCCGGATTAA GTCTGGCCAT GTTATCCGCC
TGTTCGTCGA GCGATGTTGA AGACGAGCCT GTCAGTGAGT TAACTGCCAT TCAGGCGACA
GTGTTCCCTG AAGTAAGTTG GAGCGCCTCT GTCGGTGATG GTGTGGGTGA TTATTATTCT
CGCCTCGCTC CCGCAGTCCG TTATGGAAAA ATCTTTGCTG CCGATCGTTA TGGCGAAGTC
ACCGCGTTTG ATGAAGCGAC TGGTGAGCGC GTTTGGACTA AAGATTTCAG CGAAGAATTT
CGTGATAACG CGTTAGCAAA AAACAAAGGT GCGCGTATTG CCGCCGGTGT GACTGCTGCG
CGTAATAAAG TCTTTTTAGG TGGTGAAAGC GGGCTGTTAG CCGCGCTGAA CGCCGAAGAT
GGCCAAGTGT TATGGCATGT GATTGCGGGC GGTGAATTAC TGTCAGCACC AACGGTTGCC
GATGACGTCG TGGTTGTCAG CACCAGCTCA GGTTCACTCG AAGCCTTTAA CGTCGATACT
GGCGCTAAGT TATGGGTGTA TGAAATGCAA CTGCCGAATC TGACCCTGCG CGGTACCGGT
TCTGCAGCTT ATGAAGCGGG TGGTTTCTTC ATCGGTACTG CCGATGGCAA AGTGGCTGTT
GTGATTAAAA ACAATGGTCA AGCTGCATGG GAACAGGCGA TTTACAATCC AACGGGCGGT
AACGAGTTTA CGCGTATGGC CGACGTGGAT ATGACGCCGC TGATCCTTGG CGACAACTTA
TATGCGGTGA GCTACAACGG TAACTTAGTG TCGATGGAAC TGCGCACGGG TCGAGTTGTG
TGGACACGTA AGTATTCTAG CTTTAACGAG TTAGCATCAG CGGGCTTAAG TTTGTTCGTC
GTTGACGATC ACAGCCGTAT CTACTCAGTT GATAAACGTA ACGGTCTAGA ACTGTGGAGC
AACTCAGAGT TAGCTAACCG CACTCTGACG TCACCAGCTG TGTATAAAGA CTATTTAGTT
GTGGGTGATT TCGAAGGTTA TTTACACTTC ATCGATCGCA GTACAGGGAC GATTGTGGGT
CGTGTCCAAG TGGACAGCTC TGGATTATAC AGCCAGCCAT TAGTGGTTGA CGATAAAATC
TATGTTCAAG GTCGCAGTGG AAAGTTAGCT GTTGTAACAC TTCCATAG
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| Protein sequence | MKSWCKNLLA AGLSLAMLSA CSSSDVEDEP VSELTAIQAT VFPEVSWSAS VGDGVGDYYS
RLAPAVRYGK IFAADRYGEV TAFDEATGER VWTKDFSEEF RDNALAKNKG ARIAAGVTAA
RNKVFLGGES GLLAALNAED GQVLWHVIAG GELLSAPTVA DDVVVVSTSS GSLEAFNVDT
GAKLWVYEMQ LPNLTLRGTG SAAYEAGGFF IGTADGKVAV VIKNNGQAAW EQAIYNPTGG
NEFTRMADVD MTPLILGDNL YAVSYNGNLV SMELRTGRVV WTRKYSSFNE LASAGLSLFV
VDDHSRIYSV DKRNGLELWS NSELANRTLT SPAVYKDYLV VGDFEGYLHF IDRSTGTIVG
RVQVDSSGLY SQPLVVDDKI YVQGRSGKLA VVTLP
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