Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2960 |
Symbol | flgD |
ID | 5371907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3545439 |
End bp | 3546209 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640831201 |
Product | flagellar basal body rod modification protein |
Protein accession | YP_001367154 |
Protein GI | 153001473 |
COG category | [N] Cell motility |
COG ID | [COG1843] Flagellar hook capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.198197 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCCTCA TTAATCAAAT TAACCAAGCA TCGGCGCAGA CGGCTCAAAA TAAGAGTCAG TCAAATGCTG TTACGACCAA TTCATCAACT AGCTCAACGG GCAATCCGTT TCTTGATGGC ATACGTCTGC CAAAAGATTC GATAGTACCG GAAGCGAAAA GCCAACAGTT AACTCAAGAT GATTTTTTCT CGTTATTAAG CCAACAGTTA TCGATGCAGG ACCCTTTTAA GCCTGTCGAC AACGATCAAA TGATTGCGCA GATGGCATCA TTTTCGACCG TTGACGGTAT TGGTAAGTTA AATGATCAAA TAGTCAACTT AAACAGTGTC ATGACGTCGA GCCAAGCACT GCAGGCATCG GGACTCGTTG GTCGCAAGGT GTTGATCCCA ACCGATACTG GCAATATTTC AGCTGAAAGC CCAACGATGA AAGGAGTGGT CAGTACCCCT GATAAAATTC CAGAGATTAC TGTGCGTATC GAAGATGAGA AGGGACAAGT TGTGACCACC TTTAAAGTCG ATGGTAGCGA TGGTGGTAAC GTCGATGTGA ACTGGGATGG TTTAGATAAG AATGGCCAGC CAGTGGTTGC AGGTAATTAT ACGATTAAGG CGAGTGGGTT AGTGGATGGA AAATCCCAAG AGCTGCCCGT TTCAACCTAT GCCCATGTGA GCAGTGTTTC TTTAGGGACG GCCAGTACTG GCGCCATTCT CAACTTGAGA GGTGGTATGG GTATTAAGTT AACCGACGTG TTAGCAGTGT CTGAAACTTA A
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Protein sequence | MSLINQINQA SAQTAQNKSQ SNAVTTNSST SSTGNPFLDG IRLPKDSIVP EAKSQQLTQD DFFSLLSQQL SMQDPFKPVD NDQMIAQMAS FSTVDGIGKL NDQIVNLNSV MTSSQALQAS GLVGRKVLIP TDTGNISAES PTMKGVVSTP DKIPEITVRI EDEKGQVVTT FKVDGSDGGN VDVNWDGLDK NGQPVVAGNY TIKASGLVDG KSQELPVSTY AHVSSVSLGT ASTGAILNLR GGMGIKLTDV LAVSET
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