Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2938 |
Symbol | |
ID | 5370865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3521326 |
End bp | 3522669 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640831182 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_001367135 |
Protein GI | 153001454 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAAG CAAAGTTATT GCTCGTTGAA GATGATGCCT CATTGCGTGA AGCCTTGTTG GATACCTTAA TGTTGGCTCA GTATGAGTGC ATTGATGTTG CCTCCGGTGA AGACGCTATC TTAGCCTTGA AACAACATCA ATTTGATTTA GTCATTAGCG ATGTGCAGAT GCAAGGCATT GGTGGGTTAG GATTATTAAA CTTCCTACAG CAACATCATC CTAAATTGCC AGTGTTGTTG ATGACTGCTT ATGCCACGAT TGGTAGTGCG GTGGATGCCA TTAAATTAGG CGCTGTCGAT TACTTAGCCA AACCATTTGC GCCAGAAGTC TTGCTCAATC AAGTTTCCCG CTATTTGCCG TTAAAACAAA ATGTGGATCA GCCAGTAGTT GCCGATGAGA AGAGTTTAGC TTTATTAGCA CTGGCTCAGC GGGTTGCTGC ATCCGATGCT TCGGTCATGA TCTTAGGCCC AAGCGGCTCG GGTAAAGAAG TCTTGGCCCG TTATATTCAT CAACACAGTA GCCGTGCCGA TCAAGCTTTT GTGGCCATTA ACTGTGCTGC AATTCCCGAT AATATGCTTG AAGCTACCCT TTTTGGTTAT GAAAAGGGCG CATTTACTGG CGCCTATCAA GCGTGTCCGG GGAAATTTGA GCAGGCTCAA GGTGGCACTT TGCTGCTAGA TGAAATCTCT GAGATGGATT TAGGCTTACA AGCTAAGTTA TTGCGAGTAT TGCAAGAGCG TGAAGTTGAG CGTTTAGGCG GCCGTAAAAC CATTAAGCTC GATGTACGCG TGCTTGCCAC ATCCAATCGC GACTTAAAAG CCGTGGTAGC CGCCGGTGGC TTTAGGGAAG ATCTCTACTA TCGAATCAAC GTGTTCCCCT TAGCTTGGCC CGCATTAAGT CAACGTCCAG CGGATATTCT GCCCCTTGCG CGTCATTTAC TGGTTAAGCA TGCCAAGGCA TTGAATGTCG CCGATGTGCC TGAGTTGGAT GAAAATGCAC GTCGACGTTT ATTGAGTCAT CGCTGGCCGG GGAACGTACG TGAACTCGAT AATGTTATCC AGCGGGCTTT GATATTAAGA GCCGGTCAAG TGATCACCGC CAATGACATT ATTATCGATG CGCAGGATGT GATTTTAGGC GGCGAAGACC TAGATCAATT TGTTGCCGAG CCAGACGGTT TAGGCGAAGA GCTTAAAGCG CAGGAGCATG TGATTATTTT AGAAACCCTT AATCAATGCC AAGGAAGCCG CAAACTGGTC GCTGAAAAAC TGGGGATAAG CGCCCGAACC CTAAGATACA AGATGGCAAG AATGCGTGAC ATGGGCATTC AACTGCCAAA TTAG
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Protein sequence | MSEAKLLLVE DDASLREALL DTLMLAQYEC IDVASGEDAI LALKQHQFDL VISDVQMQGI GGLGLLNFLQ QHHPKLPVLL MTAYATIGSA VDAIKLGAVD YLAKPFAPEV LLNQVSRYLP LKQNVDQPVV ADEKSLALLA LAQRVAASDA SVMILGPSGS GKEVLARYIH QHSSRADQAF VAINCAAIPD NMLEATLFGY EKGAFTGAYQ ACPGKFEQAQ GGTLLLDEIS EMDLGLQAKL LRVLQEREVE RLGGRKTIKL DVRVLATSNR DLKAVVAAGG FREDLYYRIN VFPLAWPALS QRPADILPLA RHLLVKHAKA LNVADVPELD ENARRRLLSH RWPGNVRELD NVIQRALILR AGQVITANDI IIDAQDVILG GEDLDQFVAE PDGLGEELKA QEHVIILETL NQCQGSRKLV AEKLGISART LRYKMARMRD MGIQLPN
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