Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2922 |
Symbol | flhA |
ID | 5372606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3504994 |
End bp | 3507093 |
Gene Length | 2100 bp |
Protein Length | 699 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640831166 |
Product | flagellar biosynthesis protein FlhA |
Protein accession | YP_001367119 |
Protein GI | 153001438 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.268541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGTTA AAGCGACTCT TGGTCAAGTA AAACAAATGC GGCTGAGCTC ATTCAAAGGC ATTGGTACGC CTATGGTTGT GCTTGCTGCA TTGGCCATGA TTGTTTTACC TATCCCTCCA TTTCTATTAG ACATACTTTT CTCATTCAAC ATAGCCTTAG CGCTCATCGT ATTGTTAGTC GCAATTTATA CCGATAGGCC ATTAGATTTC GCCGCTTTTC CAACTGTATT GCTGGTGGCG ACATTACTAC GACTCGCACT CAACGTCGCT TCAACTCGTG TGGTATTACT CGAAGGCCAT AATGGTGGTG ATGCGGCAGG TAAGGTGATC GAAGCCTTCG GTTCTGTGGT GATTGGCGGT AACTATGCGG TTGGTTTAGT TGTATTTATC ATTTTGATTA TTATCAACTT TGCGGTGGTG ACAAAAGGTG CCGGTCGTAT AGCAGAAGTG AGCGCCCGCT TTACCTTGGA TGCTATGCCA GGTAAGCAAA TGGCAATTGA TGCCGATTTA AATGCTGGAA CCTTAAACCA AGACCAAGCA AGAATACGTC GCGCCGAAGT GACCCGTGAA GCTGATTTTT ATGGCGCGAT GGATGGTGCT TCAAAATTCG TAAAAGGTGA TGCCGTTGCG GGTATCATGA TTTTAGTGAT CAACATCTTA GGTGGTTTCA TCATAGGTAT TGTTCAGCAT GGCTTAAGTT TCTCTGAAGC GGTTGAAATT TATACCTTGC TGACTATCGG TGATGGTCTG GTGGCGCAGA TCCCAGGCTT ATTACTGTCA ATCGCTGCCG CCTTGATGGT AACCCGTCAA AATGAATCGG GCGATATGGG CCAAATGATG ATGAGTCAGA TGTTTGACAG TCATAAATCA TTGGGTATCG CCGCCGGAGT GTTATTTGTC ATGGGTATTG TTCCTGGCAT GCCACATATG GCGTTCTTAA GCTTCGCCTT TATTACTACG GGTGCTGCCT ATTTTGTCTA TAAGCGTAAT GAATCAAAAC GCATTAAAGC CCTAGAACAA GTCAAATCTG GCCCGATTGA GAGACAAGAT AAAGAGCCTA AAGAACTGGG TTGGGATGAT GTACATCATG TTGATACTAT TGGGCTTGAG GTTGGATATC GCTTGATCCC ACTGGTCGAT AAGGGCCAAG GTGGCGAGTT ATTAAGCCGT ATAAAAGGAG TCCGTAAGAA GTTATCGCAA GAGTTGGGCT TCTTAGTACC TGCGGTGCAT ATTCGCGATA ACTTAGATTT GTCACCTAAT GCCTACCGCA TTTCTCTAAT GGGCGTAGTC GTTGGTGAGG CGGATATTCG TCACGATTGT GAATTGGCGA TTAATCCTGG CCAAGTCTAT GGCAAGCTTG ATGGTATCGA AACGCGCGAT CCAGCTTTTG GTCTTGAAGC GGTATGGATT GCCCCTGAAT TACGTGAACA TGCCCAAACA TTAGGGTATA CCGTCGTTGA TGCCGCCACA GTTGTGGCAA CCCATATTAG TCAATTGTTG ACCAATAATG CTGCTAAGTT GTTAGGATAT GAAGAAGTGC AACAACTGAT GGATATGCTT GCGAAACACT CGCCTAAGCT GGTGGATGGC TTTATTCCTG ATGTCATGCC ACTAGGACAT GTCGTAAAAG TGATGCAGAA CCTATTAAAT GAAGGGGTTT CAGTCAGAGA CTTGCGTACT ATAGTGCAAA CTTTGTTAGA ATACGGCACT AAGAGTAATG ACACTGAAGT CTTGACCGCT GCAGTGCGTA TCGCGTTGAA ACGTATGATC GTTCAGGAAA TTTCAGGCCC AGAGCTCGAA ATCCCTGTCA TAACTTTGGC GCCAGAGTTG GAACAGATGT TGCATCAGTC AATGCAAGCA ACCGGTGGTG ATGGTCCTAA CATTGAACCC GGTCTTGCAG AACGCATGCA GCAGTCCCTT GCCGATGCGG CTCAGAAGCA AGAAATGGTC GGACAACCCG CCATATTGTT GACGTCAGGT ATGTTACGCG CGACGCTGTC ACGTTTTGTT AAACATACTA TTCCTAATCT CAGAGTCATT TCATATCAAG AAATACCTGA TGAGAAGCAA ATACGTATCG TATCTGCAGT CGGCCAGTAG
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Protein sequence | MDVKATLGQV KQMRLSSFKG IGTPMVVLAA LAMIVLPIPP FLLDILFSFN IALALIVLLV AIYTDRPLDF AAFPTVLLVA TLLRLALNVA STRVVLLEGH NGGDAAGKVI EAFGSVVIGG NYAVGLVVFI ILIIINFAVV TKGAGRIAEV SARFTLDAMP GKQMAIDADL NAGTLNQDQA RIRRAEVTRE ADFYGAMDGA SKFVKGDAVA GIMILVINIL GGFIIGIVQH GLSFSEAVEI YTLLTIGDGL VAQIPGLLLS IAAALMVTRQ NESGDMGQMM MSQMFDSHKS LGIAAGVLFV MGIVPGMPHM AFLSFAFITT GAAYFVYKRN ESKRIKALEQ VKSGPIERQD KEPKELGWDD VHHVDTIGLE VGYRLIPLVD KGQGGELLSR IKGVRKKLSQ ELGFLVPAVH IRDNLDLSPN AYRISLMGVV VGEADIRHDC ELAINPGQVY GKLDGIETRD PAFGLEAVWI APELREHAQT LGYTVVDAAT VVATHISQLL TNNAAKLLGY EEVQQLMDML AKHSPKLVDG FIPDVMPLGH VVKVMQNLLN EGVSVRDLRT IVQTLLEYGT KSNDTEVLTA AVRIALKRMI VQEISGPELE IPVITLAPEL EQMLHQSMQA TGGDGPNIEP GLAERMQQSL ADAAQKQEMV GQPAILLTSG MLRATLSRFV KHTIPNLRVI SYQEIPDEKQ IRIVSAVGQ
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