Gene Shew185_2898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2898 
Symbol 
ID5369415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp3477970 
End bp3478527 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content39% 
IMG OID640831142 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_001367095 
Protein GI153001414 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTGA TTAAAACTAA AATTAAAGAT CTGCTAATTA TAGAGCCAAA AGTGTTTGGC 
GATGATAGAG GTTTTTTTTA TGAAACATTT CAAAATGAAC GCTACAGAGC AGCAGGAATA 
GATGTTGAAT TTGTACAAGA TAATCGCTCT CGCTCTACTA AGGGTGTGTT GAGAGGCTTA 
CATTTTCAAA AAACAAAACC TCAAGGTAAG CTCGTCACTG TAACTGATGG CGAAGTTTTC 
GATGTAGCCG TTGACTTGCG CCCAGGTTCT GAAACATTTG GCCAGCATGA AACGATAATA 
TTAACCGGTA AAAATAAACT GCAGTTTTAC GTTCCACCCG GTTTTGCCCA TGGTTTTTGT 
GTGCTGAGTG ACACTGCAGA TTTTCAGTAT AAATGTACTG ATTATTATGA TCCAAGCGAT 
GAAAGTGGAT TACTGTGGAA TGACCCAAGC TTGGCAATCC AATGGCCGCT TTCTCAACCA 
TTGCTTTCCG AGAAAGATGC AGTACAACCA CATCTAGCTG CAATAACACA TAATCTTATA 
AACGGGTGGG ATAAGTAA
 
Protein sequence
MNVIKTKIKD LLIIEPKVFG DDRGFFYETF QNERYRAAGI DVEFVQDNRS RSTKGVLRGL 
HFQKTKPQGK LVTVTDGEVF DVAVDLRPGS ETFGQHETII LTGKNKLQFY VPPGFAHGFC 
VLSDTADFQY KCTDYYDPSD ESGLLWNDPS LAIQWPLSQP LLSEKDAVQP HLAAITHNLI 
NGWDK