Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2873 |
Symbol | |
ID | 5369922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 3449541 |
End bp | 3451256 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640831117 |
Product | prolyl-tRNA synthetase |
Protein accession | YP_001367070 |
Protein GI | 153001389 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0442] Prolyl-tRNA synthetase |
TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCGTCA GCAAGTACCT GCTATCAACA CAGAAAGAAA CTCCTGCCAA CGCAGAAGTC ATTAGTCATC AATTAATGTT ACGTGCGGGC ATGATCCGTC GTAATGCGTC GGGCCTTTAT AGCTATCTCC CCACGGGCTT ACGCGTACTG CGTAAAGTCG AAGCCATTGT TCGTGAAGAA ATGAACAAAG CCGGTGCAAT TGAAATTCTA ATGCCTATGG TGCAACCGGC AGACTTGTGG GTAGAAACAG GTCGTTGGGA AAAGTTTGGT CCCGAGCTGC TGCGCTTTAA AGATCGTCAC AATCGCGACT TCGTACTGGG CCCAACCCAC GAAGAAGTGA TCACAGATCT CATTCGTAAA GAAGTCAGCT CATACAAGCA GTTACCGTTG AACCTTTACC AAATCCAAAC CAAATTCCGT GACGAAGTTC GTCCACGTTT TGGCATGATG CGCTCACGCG AATTCTTGAT GAAAGACGCC TACTCTTTCC ACCTTGACGT CGATACCATG AATGAAACCT ATGAGGCCAT GTACAACGCC TATAGCAACA TTCTGACGCG CATGGGTTTA GCCTTCCGTC CAGTATTAGC TGACACAGGT TCTATCGGTG GCAGCATGTC ACACGAGTTC CACGTGCTAG CCCAAAGCGG TGAAGATTTA ATTGCTTACT CAACGGGCAG CGATTACGCG GCTAACATTG AGAAAGCTGA ATCACCAGTA CCTACTGAGC CTCGCGGCGC AGCCACTGAA GAATTGCGTT TAGTCGATAC CCCAAATGCA AAGACCATTG CAGAATTGGT TGAGCAGTTT GATCTGGATA TCACTAAAAC CGTCAAAACC TTGATCGTCG TCGGTGCATC AGAAGCGACG CCGTTAGTGG CACTGATTGT TCGCGGTGAC CATGAACTCA ACGAAGTCAA AGCCGACAAG TTAGACTTAG TGGCATCACC AGTAGAAATG GCATCAGAAG CGCTGATCCG TGACGCCATT GGCGCAGGTC CTGGTTCACT TGGCCCTATC GGTCTTAACA TCCCTATCGT TATCGATCAC AGCGTTAGTG TCATGAGCGA TTTTGCTGCT GGTGCGAATG TGGATGACAA ACATTATTTT GGTATCAACT GGGAACGCGA TCTGCCGACA GCACAAGTTG CCGATATCCG TAACGTAGTC GAAGGCGAGC CAACACCCGA TGGTTTAGGC ACGTATGCGA TGGCACGCGG TATCGAAGTG GGTCATATTT TCCAACTGGG TACTAACTAC TCTAAATCGA TGAACGCGAC TGTACTTGAC GAAAACGGCA AGTCACAGGT GCTATTGATG GGTTGTTACG GTGTCGGCGT AAGCCGTATT GTGGCCGCAG CCATCGAGCA AAACTTCGAT GACCGTGGCA TCATTTGGCC AGAAGCGATT GCGCCATTTA GCGTGGGCAT TCTGCCAATG AACATGCACA AGTCGCATCG CGTAACCGAT ATCGCCGAGC AGTTATATAA AGACTTAAAC GAAGCGGGTA TTGACGTGTT ACTGGACGAT CGTAAAGAGC GCCCAGGCGT AATGTTCGCC GATATGGAAC TGATTGGTAT CCCACACACT GTGGTGATTG GCGATCGCAA TATCGATGCT GGCGTATTTG AATACAAAAA CCGCCGTACC GGTGAAAAGC AAGATATTCC ATTTGATCAA CTGCTCGATT TCCTGAAAAA CGCAGTGAAA GGCTAA
|
Protein sequence | MRVSKYLLST QKETPANAEV ISHQLMLRAG MIRRNASGLY SYLPTGLRVL RKVEAIVREE MNKAGAIEIL MPMVQPADLW VETGRWEKFG PELLRFKDRH NRDFVLGPTH EEVITDLIRK EVSSYKQLPL NLYQIQTKFR DEVRPRFGMM RSREFLMKDA YSFHLDVDTM NETYEAMYNA YSNILTRMGL AFRPVLADTG SIGGSMSHEF HVLAQSGEDL IAYSTGSDYA ANIEKAESPV PTEPRGAATE ELRLVDTPNA KTIAELVEQF DLDITKTVKT LIVVGASEAT PLVALIVRGD HELNEVKADK LDLVASPVEM ASEALIRDAI GAGPGSLGPI GLNIPIVIDH SVSVMSDFAA GANVDDKHYF GINWERDLPT AQVADIRNVV EGEPTPDGLG TYAMARGIEV GHIFQLGTNY SKSMNATVLD ENGKSQVLLM GCYGVGVSRI VAAAIEQNFD DRGIIWPEAI APFSVGILPM NMHKSHRVTD IAEQLYKDLN EAGIDVLLDD RKERPGVMFA DMELIGIPHT VVIGDRNIDA GVFEYKNRRT GEKQDIPFDQ LLDFLKNAVK G
|
| |