Gene Shew185_2820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2820 
Symbol 
ID5371859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3376137 
End bp3377834 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content49% 
IMG OID640831048 
Productalcohol dehydrogenase 
Protein accessionYP_001367017 
Protein GI153001336 
COG category[F] Nucleotide transport and metabolism
[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[COG2169] Adenosine deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACAG ATAGAGCGTC TGAGAGTGCG ATTAAGCGTG ATGAAATAGA CTCAGTGCAT 
GCACTGGAAT CCAGTGCGGG GCTACTTTCT GCGTCTATTT GCCGTGAGGC GAGGATGAGC
CGCGATCCGC GTTTTGATGG TAAGTTTTTT GTGGGCGTAT TAACGACGGG CATTTATTGC
CGTACCGTGT GTCCCGCCGT CGCGCCAAAA GAGCAAAATG TGCGTTATTT TGATTCGGCC
GTGAAAGCCG CACAGGCGGG ATTACGCCCG TGTTTGCGTT GTCGGCCCGA CAGTGCGCCA
GGTTCAAATC CGTGGAAAGG CACTGGCACA ACGTTGGCGA GGGCCATTAG TTTAATTGAA
GCGGGTGCCT TAGCGGGGAA ATCATCGGGA GAGCCAGCGT CGACTGTGAC GCAATTGGCT
GACAGATTAG GGATCAGTAG TCGTTATCTC AATAAGCTAT TTACCGAAGG CTTTGGCACT
TCGCCTAAAC AATATGCCTT ATACAGGCAG TTACTGTTTG CAAAACAACT GCTACATCAA
ACCCAATTAC CTATCACCCA AGTCGCGCTG GCGGCGGGTT TCAATAGTAT TCGCCGTTTC
AATGAGGCAT TTAAGCAAAC CTTACAGTTG ACGCCAACGC AATTAAGAAA GACCGCGTTA
ACCAAGGCGG TAAAGGAGCA GGATATTGAT TCATCAACAG GATTCGGTGA AATTGGTACT
TTGGGTGAAT TTGTGCCGCA CTATGGATTA ACCCTATATC AATACTATCG ACCCCCATTG
GATTGGGCAT CGCAGCTGGC ATTTTATCGC TTACGTGCGG TGACAGGGAT GGAATGGTTC
ACGCCGCAAG TCAGTCATCC ACAAGCGAGC GATGCAGTTC AGATTGCAGA TGAAACGAAC
CTTGCCGCTG AAGCCAAAGC TGACGATAAC GGGCTCGAAT ATGGTCGCTG TTTTGCCATC
GGCAAGATGC GCGGCACAGT GCAAATTATC CATGAGCCTA AGCTGAATCG CTTCAAACTT
GCGATTGCTT TGACCGAAGA TTCCGCCGTT GATGAGCTGC AATTGCTGGT CACTGAGGTG
CGACGCATTT TAGATCTCGA TGCGGATATG CAGCAGATTG AGCAAGGTTT AAGTACGCTA
CCGAGTTTAG GTTTAATGCC GTTTTCGGGA TTGCGCATTC CTGGCGCAGG ATCTTTGTTT
GAAGCGGTTT GCCGCGCGAT CTTGGGTCAG CAAGTGACAG TAGTGCAGGC GACTAAGTTA
CTGAATATAT TGGTTGAAGC CTATGGCGAG CGTTTTAGTC TCAATGGCCG TGAGTATCGA
TTATTCCCAA CACCCGAGGC GATTCGTGTG GCAGGTTTAA CTGAGCTTAA AATGCCGGGC
GCCCGTAAAT TAGCCCTCAA TGCGCTCGCG GCGTTTATCT GCGAACATCC TGAGGCGAGC
GTCGATGATT GGCTTAGCGT TAAAGGCATA GGTCCTTGGA CGATAGCGTA TGCCAAGCTT
CGTGGCTTGG GCGATCCAAA CGTGTTTTTG CATTCGGATT TGATTGTTAA AAAGCATTTA
TTGGCCTTAT ATATCAAGAA CAATAAGTTA GATGAAACGG CAGCCGCGGT AGTGAGCTAT
CCCCAATTGT GCGATCAGCT GAGTCAACAA ATTGCCCCGT GGGGCAGTTA CTTAACCTTT
CAGCTCTGGC ATCAATAA
 
Protein sequence
MSTDRASESA IKRDEIDSVH ALESSAGLLS ASICREARMS RDPRFDGKFF VGVLTTGIYC 
RTVCPAVAPK EQNVRYFDSA VKAAQAGLRP CLRCRPDSAP GSNPWKGTGT TLARAISLIE
AGALAGKSSG EPASTVTQLA DRLGISSRYL NKLFTEGFGT SPKQYALYRQ LLFAKQLLHQ
TQLPITQVAL AAGFNSIRRF NEAFKQTLQL TPTQLRKTAL TKAVKEQDID SSTGFGEIGT
LGEFVPHYGL TLYQYYRPPL DWASQLAFYR LRAVTGMEWF TPQVSHPQAS DAVQIADETN
LAAEAKADDN GLEYGRCFAI GKMRGTVQII HEPKLNRFKL AIALTEDSAV DELQLLVTEV
RRILDLDADM QQIEQGLSTL PSLGLMPFSG LRIPGAGSLF EAVCRAILGQ QVTVVQATKL
LNILVEAYGE RFSLNGREYR LFPTPEAIRV AGLTELKMPG ARKLALNALA AFICEHPEAS
VDDWLSVKGI GPWTIAYAKL RGLGDPNVFL HSDLIVKKHL LALYIKNNKL DETAAAVVSY
PQLCDQLSQQ IAPWGSYLTF QLWHQ