| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2811 |
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| Symbol | |
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| ID | 5372327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 3367421 |
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| End bp | 3368092 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640831039 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001367008 |
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| Protein GI | 153001327 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0225697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATAT TTGATTACCA GCCCCCAGCA GTTCCTTGGC TAGACATACG CTATAAAGAT
AGAGATCTGA TTATCATCAA TAAACCTTCG GGCTTATTGT CGAATCCGGG TCGAGCGGCT
CACACCTTCG ATTGCGCGTT AATCCGCTTA CAAACCCTTT ATCCAGAAAC GATTTTAGTG
CATCGGCTCG ACTGCGCGAC CTCGGGCATT ATGGTGTTCG CCCGTAATAA AAAAGCCGAG
TCGCATTTAA AAACGCAGTT TCAAGATAGG CAGAGTAAGA AAGTCTATAT TGCCGAAGTG
ATGGGACATG TGCCGCAGGA ACAGGGCATG ATTGACCTCG CGATTGCGCC AGACACAGAG
CATCCACCCT ATCAAAAGAC GCTACAGGCA GGAGAGACTG GCGGTAAAAG CGCACTCACC
TACTACCGTG TACTAGAACG CAGAGTAAAC AGCACCTTAG TCGAGCTTTC GCCAGAAACA
GGCCGCACCC ATCAATTGCG TGTGCATATG CTTGCCCTAG GCCATGCGAT TTTAGGCGAT
GAATTTTACG GTGATGCCGA GGTTATCAAA GCCGCACCGC GTTTATGCTT ACATGCACAA
AGCTTAAGTC TGAGCCATCC CTATTCGGCT AAACCGCTCT TTTTTAGCAG TAAACATCCC
TTTAGCGAAT AA
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| Protein sequence | MQIFDYQPPA VPWLDIRYKD RDLIIINKPS GLLSNPGRAA HTFDCALIRL QTLYPETILV
HRLDCATSGI MVFARNKKAE SHLKTQFQDR QSKKVYIAEV MGHVPQEQGM IDLAIAPDTE
HPPYQKTLQA GETGGKSALT YYRVLERRVN STLVELSPET GRTHQLRVHM LALGHAILGD
EFYGDAEVIK AAPRLCLHAQ SLSLSHPYSA KPLFFSSKHP FSE
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