| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2790 |
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| Symbol | |
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| ID | 5372838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 3343949 |
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| End bp | 3345400 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640831018 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_001366987 |
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| Protein GI | 153001306 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00276408 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATTG AAACCCCGAT TTTAATCACA TTTGTTGGTT ACTTAGTATT GATGATGGGC
ATAGGTTTTT GGGCTTACCG TGCTACCGAT ACTGTTGATG ATTATATTTT AGGTGGCCGT
AAAATGGGCC CCGCGGTAAC CGCACTCAGT GTGGGTGCAT CCGATATGTC AGGTTGGCTG
TTACTGGGTT TACCCGGCGC AGTTTACTTA GGCGGCTTAG GTGAAGCTTG GATTGGCATA
GGGTTAATTT TTGGCGCTTG GCTAAACTGG CTATTTGTCG CCAGACGACT GCGTATTTAC
ACTCAACTCG CCGATAACGC CCTCACCTTA CCGGATTTCT TCGAGAAACG TTTCCACGAT
ACCCAGGGCT ATCTCAAGCT CGTCTCCGCA ATCACTATTT TAGTGTTTTT CACTTTCTAT
GCTTCCTCAG GCATGGTCGG TGGCGCGATT CTGTTTGAAA AAGTTTTTGG TCTCGATTAC
ACAGTGGCGC TGGTGATTGG CTCAGCCATC ATAGTCGGTT ACACCTTTAT TGGTGGCTTC
TTTGCTGTGT GTTGGACAGA CTTCTTTCAA GGCTGTTTGA TGCTTGTCGC CCTCTTAATC
GTCCCCTTTG CCGTTTTCTC TCACCCTGAA AGCCACGCCG GAATTGAAAC TATCGATCCT
GCGATGTTGG CCTTGGTCAG CGACAAAACC ACAGTGATAG GCATGTTGTC TTTACTCGCA
TGGGGTCTTG GCTATTTTGG TCAGCCGCAT ATTTTGTCGC GCTTTATGGC GATAGGCAGT
GCCGATGCCC TGCCCTTATC GCGCCGTATT GCCATGAGCT GGATGGTCTT ATCTTTAATT
GGCGCTTTAG CCACAGGTAT TGCCGGTTCT CTGTATTTCG CCAATGCGCC ACTGGCGAAT
TCAGAAACGG TATTTATTCA TTTAGCCCAA GCAGCGTTTA ACCCTTGGAT TGGTGGTCTA
CTTATTGCGG CCATTTTGTC AGCCATCATG AGCACTATCG ATTCACAGTT ACTGGTGTGT
TCAAGCGTGA TCACAGAAGA TTTTTACCGT AAATGGTTAC GCCCACAAGC GGATGACCGC
GAGTTGATGA TGGTCGGTCG CATGGGCGTG CTGGCGATTG CCGTGATCGC AGGCATCATT
GCCCTTAATC CTGAAAGCAG TGTATTAAGC CTTGTGAGTT ATGCTTGGGC AGGCTTTGGT
GCGGCCTTTG GTCCTGTAGT CTTATTATCA CTATTTTGGA AGCAATACAG TCGTAATGGC
GCCATTGCTA CTATTATTGT CGGCGCATTA ACGGTCGTGA TTTGGAAGCA ACTGACGGGG
GGGATTTTCG AACTATACGA AATCCTGCCA GGATTTGTAT TCGCCACATT CGCCGGTATT
TTGGTGAGCA AATTGTCTGC ACCAAGTGAA AATGTAACAA CAGAGTTCGA ACAATTTAAG
TCTGCACTTT AG
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| Protein sequence | MTIETPILIT FVGYLVLMMG IGFWAYRATD TVDDYILGGR KMGPAVTALS VGASDMSGWL
LLGLPGAVYL GGLGEAWIGI GLIFGAWLNW LFVARRLRIY TQLADNALTL PDFFEKRFHD
TQGYLKLVSA ITILVFFTFY ASSGMVGGAI LFEKVFGLDY TVALVIGSAI IVGYTFIGGF
FAVCWTDFFQ GCLMLVALLI VPFAVFSHPE SHAGIETIDP AMLALVSDKT TVIGMLSLLA
WGLGYFGQPH ILSRFMAIGS ADALPLSRRI AMSWMVLSLI GALATGIAGS LYFANAPLAN
SETVFIHLAQ AAFNPWIGGL LIAAILSAIM STIDSQLLVC SSVITEDFYR KWLRPQADDR
ELMMVGRMGV LAIAVIAGII ALNPESSVLS LVSYAWAGFG AAFGPVVLLS LFWKQYSRNG
AIATIIVGAL TVVIWKQLTG GIFELYEILP GFVFATFAGI LVSKLSAPSE NVTTEFEQFK
SAL
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