| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2783 |
|---|
| Symbol | |
|---|
| ID | 5373449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 3336064 |
|---|
| End bp | 3337017 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640831011 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001366980 |
|---|
| Protein GI | 153001299 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACA CTGCGCGACT CTCAGCCTCG GCCGATGGCT TGCCGCTGTT TGCCGATGGC
TTGCATTTAA CCGAGCAAGA GCTGCTGGCG TGCCAAAATA TCGCCCGTGC TATGCCTGAG
CGTTACAGCC GTGCCCGCGC TAATTTAGCG GGCCATCGCA GCAGCTTAAT CAAAGGCCGC
GGGATGGAGT TTGCCGAGGT GCGCCACTAT CAACAGGGCG ACGATGTGCG CACCATTGAT
TGGCGCGTGA CCGCTCGCAC GGGCAAAACC CACACTAAGT TATTTGTCGA AGAACGCGAG
CGCCCTATTC TGTTGTTGAT CGACTTGAGC CAAAGTCTCT ATTTTGGCTC AAGTTTATTG
CTGCAATCGG TGCAAGCAGG ACACTTAGCA ACCACCTTAG GTTGGAATGC CATTAACCAT
GGCGATAGAC TCGGCGCCTT GATCGCCAGC GAGTCTGAGC ATCTAGAGCT TAAACCCCGC
AGCCGTCGTC AGGGCATATT GCAATTGATC TCGGGCCTGC GCCGCGTGCA TGAGAATCAA
CTCAATCATG TTGGCAGTGG CCAGCGCGAT CCTGATCATA TTCTGCGCGC CTGTCAGCGA
TTACAACGTA TCGCCAAACC CGGTTCCTTG GTTTGGATAG TGACCGATGG CAGCCATTTT
AGCCCCCAAT GTATCGCGCC ATTAACCGAG CTTAAACGTC ATTGTGATGT GGGCGCCTAC
CTGATTACCG ATCCCCTGCG CCAAGGGACA CTGCCGTTAC CGCACAACTT TAGTTTGCCA
GTACGGGATG GGGATGAGGA CTTAGTGCTC ACCCGCCACA GTTATCAGGC TTGGCTCGAC
ATTCAGTTGC GTCAGCAAAG GGACTTTATC GCCATGATGC AGCAACTGCG CGTGCGCACT
CAGCTCATCG ATGCGGGTGC TCCCCTAGCC CATCAATTGG AATTATTGCG TTAA
|
|---|
| Protein sequence | MSDTARLSAS ADGLPLFADG LHLTEQELLA CQNIARAMPE RYSRARANLA GHRSSLIKGR
GMEFAEVRHY QQGDDVRTID WRVTARTGKT HTKLFVEERE RPILLLIDLS QSLYFGSSLL
LQSVQAGHLA TTLGWNAINH GDRLGALIAS ESEHLELKPR SRRQGILQLI SGLRRVHENQ
LNHVGSGQRD PDHILRACQR LQRIAKPGSL VWIVTDGSHF SPQCIAPLTE LKRHCDVGAY
LITDPLRQGT LPLPHNFSLP VRDGDEDLVL TRHSYQAWLD IQLRQQRDFI AMMQQLRVRT
QLIDAGAPLA HQLELLR
|
|---|
| |