| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2780 |
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| Symbol | fadJ |
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| ID | 5372871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3331384 |
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| End bp | 3333504 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640831008 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_001366977 |
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| Protein GI | 153001296 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02440] fatty oxidation complex, alpha subunit FadJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAGA CCTTTAATTT AACCCGCCGC GACGACGGCA TTGCTATTTT GACTATGGAT
GTTCCTGGCG AAACCATGAA CACCCTAAAA GCGCAGTTTG GCCCTGAAAT CAGTGAGATT
CTGGCCGAGA TCAAAAGTGA TTCGAGCATT CGCGGTTTAG TGCTGATCTC AGGCAAAAAA
GATTCTTTTG TTGCGGGCGC AGATATTTCT ATGCTCGATG CCTGTAAAAC GGCGGGCGAT
GCCAAAGCCT TATCCCAGCA AGGCCATGTG GTTTTTAATG AGCTAGAAGC CTTAACGATT
CCTGTGGTTG CCGCAATTCA TGGTGCCTGT TTAGGCGGTG GGTTAGAGTT AGCCTTAGCT
TGTCATCAAA GGGTATGTAG CGACGATGGC AAGACTATGC TCGGCGTTCC GGAAGTCCAA
CTTGGCTTAT TGCCAGGCGG CGGCGGGACT CAACGTTTGC CTCGTTTAGT CGGCATTACC
ACCGCCTTAG ATATGATGCT AACCGGTAAA AAAATTCGTC CTAAGCAAGC TTTGAAAATG
GGCTTAGTGA ATGATGTTGT GCCGCAGACA ATTTTGCTAC AAACCGCAGT TGAGATGGCG
CTTGCGGGTA AACGTGCACC AAAACCAGTT AAAAAGTCAC TCGTTAATCA AGTGCTTGAA
GGCACGAGTT TCGGCCGTAA CATTATTTTC GATCAAGCGA CTAAGCAGGT CGAAAAGAAA
ACCCAAGGTA ATTATCCTGC GCCTGCCAAG ATCATTGACT GCGTGCGTCA AGGAATTGCT
AAGGGCATGC AAAAGGGTTT AGAAGTCGAA GCCAGTCATT TTGCCGAATT AGTGGTATCG
AAAGAATCTG AAGCGCTGCG CAGTATTTTC TTCGCGACCA CAGAAATGAA GAAAGAAACT
GGCGCTGAAG GTGCGAGCCC GCGTAAAGTG AAAAAAGCGG TGATCTTAGG TGGCGGTTTA
ATGGGCGGTG GTATCGCATC TGTCACAACG ACCAAGGCCA AAATCCCCGT TCGTGTCAAA
GACATCAGCG AAAAAGGTTT AAGCAATGCA TTAGCTTACG CCTACAAGCT GTTGGATAAA
GGGGTTAAGC GCCGTCATAT GACGCCTGCT GCTCGTGACA ACTTAATGGC ACTGATGACT
ACAACGACTG AATATAAAGG CGTTAAAGAT GCCGACATCG TTGTGGAAGC GGTATTTGAA
GACTTAGCGC TTAAGCATCA AATGGTGAAA GACATTGAGC GTGAGTGTGG TGAGCACACT
ATTTTTGCGT CAAACACCTC ATCTTTGCCG ATTAGCCAAA TCGCCGAGGC GGCGACACGT
CCAGAGAACG TGATTGGTCT GCATTATTTC TCACCAGTAG AAAAAATGCC GCTGGTGGAA
GTGATTGCCC ATGCCAAAAC GTCGCCAGAA ACCATTGCGA CCACGGTCGC ATTTGCCCGT
AAGCAAGGTA AAACACCGAT AGTGGTACAA GACGGCGCGG GTTTCTACGT GAACCGTATT
CTTGCGCTCT ACATGAACGA GGCCGCGCAA TTATTACTTG AAGGCCAAAG TGTTGAACAT
CTGGATAAAG CCTTAGTGAA GTTTGGTTTC CCTGTGGGCC CCATTACTTT ACTCGACGAA
GTGGGTATCG ACGTGGGCGC TAAGATTTCA CCAATCCTCG AAAAAGAATT GGGTGAACGT
TTTAAAGCGC CAGCGGCTTT TGACAAGCTT TTGAGTGACG ATCGTAAAGG CCGTAAAAAT
GGTAAAGGTT TCTATCAATA CGGCGCATCG AGCAAGAAAG CTAAAGCTGT CGATGAGAGT
GTTTATGGCG TGTTAGGTAT TAAGCCAGGC ACCAATAAAG ACGCAAAAGC GGTTGCCGAG
CGTTGTGTCG TACAAATGCT CAACGAAGCG GTGCGTTGTT TAGAAGATGG TATTATCGCA
TCACCAAGAG ATGGTGATAT TGGCGCCATT TTCGGTATTG GCTTCCCACC ATTCCTCGGT
GGACCATTCC ACTATATTGA CACTTTGGGC GCCGCGAACT TAGTGAAGAT CCTTGAAAGT
TATCAAAGTC AATTCGGTAA CAGATTCGAA CCTTGTGAGC GCTTAAAAAC CATGGCTCAA
GAAAACGCGC ACTTTTTCTA A
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| Protein sequence | MEKTFNLTRR DDGIAILTMD VPGETMNTLK AQFGPEISEI LAEIKSDSSI RGLVLISGKK
DSFVAGADIS MLDACKTAGD AKALSQQGHV VFNELEALTI PVVAAIHGAC LGGGLELALA
CHQRVCSDDG KTMLGVPEVQ LGLLPGGGGT QRLPRLVGIT TALDMMLTGK KIRPKQALKM
GLVNDVVPQT ILLQTAVEMA LAGKRAPKPV KKSLVNQVLE GTSFGRNIIF DQATKQVEKK
TQGNYPAPAK IIDCVRQGIA KGMQKGLEVE ASHFAELVVS KESEALRSIF FATTEMKKET
GAEGASPRKV KKAVILGGGL MGGGIASVTT TKAKIPVRVK DISEKGLSNA LAYAYKLLDK
GVKRRHMTPA ARDNLMALMT TTTEYKGVKD ADIVVEAVFE DLALKHQMVK DIERECGEHT
IFASNTSSLP ISQIAEAATR PENVIGLHYF SPVEKMPLVE VIAHAKTSPE TIATTVAFAR
KQGKTPIVVQ DGAGFYVNRI LALYMNEAAQ LLLEGQSVEH LDKALVKFGF PVGPITLLDE
VGIDVGAKIS PILEKELGER FKAPAAFDKL LSDDRKGRKN GKGFYQYGAS SKKAKAVDES
VYGVLGIKPG TNKDAKAVAE RCVVQMLNEA VRCLEDGIIA SPRDGDIGAI FGIGFPPFLG
GPFHYIDTLG AANLVKILES YQSQFGNRFE PCERLKTMAQ ENAHFF
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