Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2764 |
Symbol | |
ID | 5371169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 3312119 |
End bp | 3314176 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640830992 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001366961 |
Protein GI | 153001280 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00507569 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACTGCTG AGCCCAATAA ACCTTGCCAA ATTAAGCGTG ATTACCCGCA ATTAATCAAC CTTTATCCCG CAACCGCTGA CACTGATGCA CACTATCTCA GCAAGTTGAG CATTTATCAG CAGCGGGTAT TTGAGGCTCA TTCACAGCAA AAACTCTTAG TATTAGGCCA AATTGGTCTA AGCAACGGGC TTGAACTCTT ATCTTGGTGG CGCGCTCATT CGCACCTTAG CCAACGTTTA CTCTTAAAAG TGTTCGAACC CAATCCGATT AATGCTTACG AACTTAAATT ACTTTGGGAT CAATCCGCCT GTTTAACCAA AGAGCCTGAA CTTGAGCCAC TTGCCCAACG CTTACTTCAT GCAGAGCCTG CGGCTATTAT AGGTTGCCAG AGATTAATTT TTGATGACGG TCGTTTCACA ATCGACCTGC ACTTTGGTGA TATTCAATCC CAGCTCAGTT CACTCATCCA TTCGCCAATG CATCCGGTTC AACACTGGTT GATATTGCCC CATCTGCTAC AGGCGCTACA TCATCAAAGC CACTGGCAGA TGGCAAAACT CAGTGACGAT AGCGCGACCA TTGCCACTAT TGGATTAAGC GAATCAAGCG GATTAAGTGA AACAACAGTC AACCGTTTCC AAGCCTGTGG CTTTACTGTG AGCGATATCA ATGAGCTGGG TATCCATCAG CCAGTCACAT TGATTAATCA CCAACCTGAC GCCGTACTGC TACACGAGCG CCAAGTCTTA CGTCAGCAAG ACGCTAAAGC CTATGCTTTT AATCCTATGG CTGCAATCTT ATCCTCGGCG ACGCAAAGCT CAATTGCCAT CATAGGCGGC GGCTTAGCCT CGGCGCATTT GGCGCTGTCT TTGGCTGAGC GCGGCCAAGG TGCACAGGTA TTTTGTAAAG ATGCCGAACT AGGCCAAGGC GCATCGGGCA ATCGCCAAGG AGCCATTTAT CCGCTGCTGA CCCCAGAAAA TGACGAGCTG AGCCGCTTTT TCCAACAAGC ATTTTTATTT AGCCGACGTC GAGTGCAGGC GCTGACATCC GCCCCCGCCG ATAATCAGAC GCCGATTTCC CATGTTTTTT GCGGCGTATT GCAAACCGCC CACGATGAAC GCAGCCAATT ACGACTCGAT AAAATCATTC AAGGCCAACC CTGGCCAAGT GAAATCGCCT ACGCCGTTGA TGCTGAGCAA GCCAATGCCA TTGCCAAGAT CAATCTCGAT AAGCCAGGCT TTTTTTATCC CTTAGGTGGC TGGGTTTGCC CATTTGAATA TGCCGACGCT GCGATACAAA AAGCGATGCA ACTGGCCGAT GTCAGTGTCT CGCTCAATAC TGACATCCTT GCCATTGAAC GCCAAAGCGA TGGCTGGGTT TTATTAACTG AAAAGGAACG TCTCGGGCCC TTTGCGCAAC TTGTACTCGC CAATGGCGCA GAATTGACAC AATTTGATGC CAGCAACAAA TTACAAATTA GCCCCTTTCG CGGCCAAGTC AGCCATGTGC CCGCACAATT TCAATTGAGT CAGCTCGCAA CTGTACTGTG CGCCAACGGT TATTTAACGC CAAGTCACCA AGGGCTCCAC TGCCTAGGCG CGAGTTACGT TAAAGAACCT AAGCATTTAG ATTTTTGCCC GCAGGAGCAA CAGGAAAACC TCGCCAAAAT GCACGAGAGT TATCCGAAGC AAAGCTGGCT TGAAGATATC GACATGAGTG GCAACAATGC CCGTGTTGGC GTGCGTATGG TGACGCGGGA TCATTTCCCT ATGATGGGCT GCGCGCCCGA TGTACCAAAA ATTATTAAAG ATTATGCGCA ACATCAACTC ACTAAAGAAA GTCGCCACTA CTGGCAAACC ACGCCAGCGC CAGTGCATCA AGGACTGTAT ATTCTTGGTG GGTTAGGCTC GCGGGGGTTA AGTTCTGGGC CACTGGCCGC CGAATGTCTC GCCGCGCAAC TTTGCGGCGA ACCAATACCG CTCGACAAAG CAACCCTGTG TAAACTCAAC CCCAATCGCA TGTGGCTGCG AAAATTGCTC AAGGGTAAAG CGCTCTAG
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Protein sequence | MTAEPNKPCQ IKRDYPQLIN LYPATADTDA HYLSKLSIYQ QRVFEAHSQQ KLLVLGQIGL SNGLELLSWW RAHSHLSQRL LLKVFEPNPI NAYELKLLWD QSACLTKEPE LEPLAQRLLH AEPAAIIGCQ RLIFDDGRFT IDLHFGDIQS QLSSLIHSPM HPVQHWLILP HLLQALHHQS HWQMAKLSDD SATIATIGLS ESSGLSETTV NRFQACGFTV SDINELGIHQ PVTLINHQPD AVLLHERQVL RQQDAKAYAF NPMAAILSSA TQSSIAIIGG GLASAHLALS LAERGQGAQV FCKDAELGQG ASGNRQGAIY PLLTPENDEL SRFFQQAFLF SRRRVQALTS APADNQTPIS HVFCGVLQTA HDERSQLRLD KIIQGQPWPS EIAYAVDAEQ ANAIAKINLD KPGFFYPLGG WVCPFEYADA AIQKAMQLAD VSVSLNTDIL AIERQSDGWV LLTEKERLGP FAQLVLANGA ELTQFDASNK LQISPFRGQV SHVPAQFQLS QLATVLCANG YLTPSHQGLH CLGASYVKEP KHLDFCPQEQ QENLAKMHES YPKQSWLEDI DMSGNNARVG VRMVTRDHFP MMGCAPDVPK IIKDYAQHQL TKESRHYWQT TPAPVHQGLY ILGGLGSRGL SSGPLAAECL AAQLCGEPIP LDKATLCKLN PNRMWLRKLL KGKAL
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