Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2760 |
Symbol | |
ID | 5371740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3304849 |
End bp | 3308280 |
Gene Length | 3432 bp |
Protein Length | 1143 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640830988 |
Product | hypothetical protein |
Protein accession | YP_001366957 |
Protein GI | 153001276 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3170] Tfp pilus assembly protein FimV |
TIGRFAM ID | [TIGR03504] FimV C-terminal domain [TIGR03505] FimV N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000120005 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTC GCACTTCGTA TCTTGTGGGT CTAATGGCCA CTGTTTTAGC TGTTTCTTCT ACCGCTTATT TTATTGATCC CGCCGTTGCA GCAGATACGC CAAGATTAAA ACCCTTAAAA ATCATGGGGC CAGACGGACA GATCCGTCAA GTTAATCATC AATATGGCCC AACGACATCC AGAGACACTT TTTGGAGCAT AGCGCAAAAA GTCCGTCCCG ATGCCAGTGT CAGCGTCTAT CAAGTGATGG CCGCGCTATA TGATGCTAAC CCCCATGCGT TTAACTCTGC CAGCTACAAC AGTTTAGAAC GTGGCATGAT CCTGCTGATC CCGTCTAAAG AAGTCATGCT GTCGATTCCC AATAGTATGG CGATAGCAAG AGCAGAGCAA AGCGACAGAC AATCCCGTGC GCCAGCGAAA GCGGTGCAGA AACCTGCTGC GAAAGTCACT ACGCAAGCGC CTGTTACTGC TCCTGTTGTG ATTGCTGAAA CCAAAGTGAT CACTGAAACC AAAGTGACGC CGCCCAAAGT GCCAGTGGTA GAAACGCCGG CGCCAGACAA GCCTAAGATG CTGAGCTCTG ATGTAACGTC GCGCTTAGAA GCGGCTGAAA GTAAAAATCT GTCATTAACC GATGAATTAG CTCGCACCCA AGATCAACTC ACTGTCCGCA CTTCAGATGT TGAAGCGCTA AAAGTGAAAG TTGAAGAATT GAATCAACGC ATTGCCGTGC TAGAAGAAAC CCTGCAAGCC AGCAAACTGC AAAATCAAGC TTTGAAAGCC GAAGTTGAAG CCGCCCAAAC GCCAGAGATG GCAACGGGAA CGGCTGAAGC TGAGACTCAG GCGCCTGCTG AGCCCGATGA TTTATGGCGT AATATCCTCA ACAGTCCAGT GTTAATGATT GCTGCTGCTG TGATCCCTGC CTTGTTCTTG TTACTGGCGG TGTTCTGGTT GCTGCGCCGT AAGCGTAATA AAGAACGTCG TGAAATGCAG GCGCAAGAAG CGGTGATGGC CGCGGGTGCT GCTGGCGTTG CAGGTACTGC CATCATGGAC ATGGATGATG ACGACTTAGA TGATATGGCG GTGCATTTAG ATACCGACCA TGCCGACTCT ATCGATAGCT TGCTTGATAT GGGCAGCGTC GATTTACAAC CTGAGCAAGA TTTGACTGAC TCAAACGATC AGATGGATAT GGCGTCTGAA ATGTTTGTCG ATCCGGGTCT CTCTGCTGAA CCTGAGGTTG AAGACGAAGG TCAGTCTCTT GATGACCTGT GGGCCGAAGC CATGGGCGAT CAGGAAGAGG ATATTGTTGA GGAGAAACCT AAATCTGACA ATATTCTTGA GGAAGCCGAT CTCGATGCGC TATTAGCGGG CCTAGGTTCA GAAGACAACA CTGACGCTGA AGACGATTTA AGTGAATTAG AGCGAAACTT TGCTAGCGAT TTAGCTGAAG AAGACGTTGA AGTAGAAGAT ACTCAAGCTG CCAATGAAGC CGTCGCCGAT GACGATGATC TCGATGCCTT ACTTGCCGAG TTTAGTGTTC CTGCTGAAGC TCCAGAAACG GCAAAAGAAC CTGCAACAGC ATCTATTGAG TCTAACGATG AAGATCTCAG TGCCGCCATC GCCGCAGAAC TCGATGATGA GCTAGATGAT GAACTGGGCG GAGAAGAGGT TGATGATATC GATGCCCTAT TGGCCGATTT CGATAAACCA ACGCCAACCG CAGAACCTGA AGTCGAATCT GATCTTGGCG CTGAAATTGC CGCCGAGTTA GATGCCGAAC TTGATGAGCT GGGCGTAGAA GATACCGATG ACATCGATGC CTTGTTAGCA GATTTTGATA AACCAGCAGA ACCTGAAGTC GAGCCTGATC TTGGCGCTGA AATTGCCGCC GAGTTAGACG CAGAGCTGGA TGAACTGGGC GTAGAAGACA CTGACGATAT CGATGCGCTG TTAGCAGACT TTGATAAACC AGTAGAACCC GAAGCAGAGC CTGATCTTGG CGCTGAAATT GCCGCCGAGT TAGATGCAGA GCTTGATGAG CTTGGCGTCG AAGACACTGA CGATATCGAT GCGCTGTTAG CTGATTTCGA TAAACCAGCA GAACCCGAAG TTGAACCCGA TCTTGGCGCT GAAATCGCCG CCGAGTTAGA CGATGAACTG GATGAATTAG GCGTAGATGA ATCCGATGAT ATCGATTCGT TGTTGGCGAG TTTTGATGCT GAGCCTGAAA TCAAAGTTGA TGCTGAAGAC AATGCCGAAA ACGATACCGC AGATGATGCG ATCAGTGCAG AAATTGCCGC AGAGCTAGAA GCTTCGTTAC CGGAAGATAT CAAGGGCGAA GCGTCAGGCG ATGAAGATTT AGATGCGCTG TTAGCTGAAT TTGATGTGCC AGAGCAACTC GATGCCGATG AAGATGAATT CGACTTCGAT ATGGAAACGG CGCAGCTTGA TGCGGACGAT AACGCCACAG ATGAAGACAA TTTACTCAAA GGTATTGGTG CGTCTCACTC GATTGATGGC ACTGATGATA CTTTCTCGTT AGTTGAAGAG TTGGGTGAAG ATGATGATTC TGACGCCCTG ACTACGGCTG CAGCCACTTT GGCAGCCGCT ACCGCGGCAG CGAGTGTTAA GGAAAAAGAG TCTTCTTTCT TTAATGATTT AAAAGCCAAT AAGAGCAAAG ATCCCCACGT GCTTGATTGG GACTCAGAGC TTGATTTTGC GCCTAAGGCC AAACCTGCTG CGACGCCAGC CGATGCCGCC GCTGAAACGG ATGTCGAGCC TAATGCCGAT GCTTCGCTAG CTGATACGCC TACTCCGGAT GATGCGACTC AAGAGAAGCC GATTAAGGCG ACGCGTAACG ATGTTGATTT TAGTGAAGAT TTTAAACTCG ATACCCAAGA GGATGCTGAC GATTCTGAGC AAGGCCTCGA TTTAAGCGAC GACAATGTAC TTGCTGCTTT CACGGCCAAT ACCGATTTTG ATGACGATGA AGATGTACTG ACGTCGGAAG ACAGTTTCTC ACTCGTCGAT GATCTCACAG TCGATGAAGC GTTAGCTGCA CTCGATGCTC AAGAGTCGCG TAAAGCGCAG AAGAAGTTTG TTCCTGAGCA TGATTTAACG AATTTCCAAA ATGAAAACGG CTTTATCGAC ATCGACAAGT TGTTGAATGA TGCCGATGAA GACGGCACTG ATACCGATTT GTATTCGGAA GTCGACGTGG AAATGAGTGA TGTCGGAGCC TTAATTGGCG ATGCCGCTAT GATTGATGTC GATGATGAAG AAAACTCAGT CAACGCTAAG CTGGATTTAG CCCGCGCTTA TATCGAAATT GACGACAGCG ACAGCGCCAA AGCCCTGCTC AAAGAAGTGC AAATTGACGG TAATGAGCGC CAGCAAGATG AAGCCGGACG TTTACTCAAA GAGATGAGTT AA
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Protein sequence | MKFRTSYLVG LMATVLAVSS TAYFIDPAVA ADTPRLKPLK IMGPDGQIRQ VNHQYGPTTS RDTFWSIAQK VRPDASVSVY QVMAALYDAN PHAFNSASYN SLERGMILLI PSKEVMLSIP NSMAIARAEQ SDRQSRAPAK AVQKPAAKVT TQAPVTAPVV IAETKVITET KVTPPKVPVV ETPAPDKPKM LSSDVTSRLE AAESKNLSLT DELARTQDQL TVRTSDVEAL KVKVEELNQR IAVLEETLQA SKLQNQALKA EVEAAQTPEM ATGTAEAETQ APAEPDDLWR NILNSPVLMI AAAVIPALFL LLAVFWLLRR KRNKERREMQ AQEAVMAAGA AGVAGTAIMD MDDDDLDDMA VHLDTDHADS IDSLLDMGSV DLQPEQDLTD SNDQMDMASE MFVDPGLSAE PEVEDEGQSL DDLWAEAMGD QEEDIVEEKP KSDNILEEAD LDALLAGLGS EDNTDAEDDL SELERNFASD LAEEDVEVED TQAANEAVAD DDDLDALLAE FSVPAEAPET AKEPATASIE SNDEDLSAAI AAELDDELDD ELGGEEVDDI DALLADFDKP TPTAEPEVES DLGAEIAAEL DAELDELGVE DTDDIDALLA DFDKPAEPEV EPDLGAEIAA ELDAELDELG VEDTDDIDAL LADFDKPVEP EAEPDLGAEI AAELDAELDE LGVEDTDDID ALLADFDKPA EPEVEPDLGA EIAAELDDEL DELGVDESDD IDSLLASFDA EPEIKVDAED NAENDTADDA ISAEIAAELE ASLPEDIKGE ASGDEDLDAL LAEFDVPEQL DADEDEFDFD METAQLDADD NATDEDNLLK GIGASHSIDG TDDTFSLVEE LGEDDDSDAL TTAAATLAAA TAAASVKEKE SSFFNDLKAN KSKDPHVLDW DSELDFAPKA KPAATPADAA AETDVEPNAD ASLADTPTPD DATQEKPIKA TRNDVDFSED FKLDTQEDAD DSEQGLDLSD DNVLAAFTAN TDFDDDEDVL TSEDSFSLVD DLTVDEALAA LDAQESRKAQ KKFVPEHDLT NFQNENGFID IDKLLNDADE DGTDTDLYSE VDVEMSDVGA LIGDAAMIDV DDEENSVNAK LDLARAYIEI DDSDSAKALL KEVQIDGNER QQDEAGRLLK EMS
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