Gene Shew185_2704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2704 
Symbol 
ID5373656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3237289 
End bp3238182 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content50% 
IMG OID640830932 
Producthypothetical protein 
Protein accessionYP_001366901 
Protein GI153001220 
COG category[R] General function prediction only 
COG ID[COG1090] Predicted nucleoside-diphosphate sugar epimerase 
TIGRFAM ID[TIGR01777] conserved hypothetical protein TIGR01777 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.148152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATAC TGATCACTGG CGCAAGCGGC TTTATTGGCC GCCAATTAGT CGAACGATTG 
GCGCCCCATC ATCAACTGAC GTTATTAACG CGCTCAGTGC AACAAACGCA GAGAATACTC
GGTAATCAGC ACCATTACCT TGAGAGCCTC GATGCGCTGA GCGACCTGAA TCATATCGAC
GCCGTAGTGA ATCTTGCGGG CGAGCCGATC GTCGCTAAGC GCTGGAGCAA AAACCAGAAG
CAGCGGATTT GTGATAGCCG TTGGGATATC ACGGCAAGAT TAACTCAGCT AATACAGCAG
AGTAGTAATC CGCCTAAGAT CATGGTGAGT GGTTCGGCAG TGGGTTATTA CGGTCGACAT
GATGATAAAT TGCTCGATGA ATCCAGTGGT GCCCATGTTG AGTTTAGCCA TGACATCTGC
CGAAAATGGG AGCAAGAAGC GCTTAATGCA AACACTGAGC ACACCCGCGT CTGCATTATC
CGTATCGGGA TTGTGTTAGG AAAAGGCGGC GCATTAGAGA AAATGTTACC GCCCTTTAAG
CTCGGACTCG GTGGCCCAAT TGGTCATGGA CGTCAAGGCA TGAGTTGGAT CCATGTGCAA
GATCTCATTT CCCTTATCGA CTTTTTACTC ACCCAAGAAC ATTGCAAAGG CGTATTCAAC
GCCACAGCCC CCAACCCAGT CAGTAACGCT GTGTTTACCA AAGCACTTGG AAAAGCACTC
AATCGCCCTG CCCTTATCAC GACCCCTCCG CTTGCATTAC GCTTGGCTAT GGGTGAAATG
TCGGAGCTGT TGACCGAAGG ACAGTTTGTT TATCCTAAAC GCGCCCTCGA AGCCGGTTTT
CAGTTTCAAT TCAGTGACCT CGACAATGCC TTAACCGACG TGTTAGCCAA ATAG
 
Protein sequence
MNILITGASG FIGRQLVERL APHHQLTLLT RSVQQTQRIL GNQHHYLESL DALSDLNHID 
AVVNLAGEPI VAKRWSKNQK QRICDSRWDI TARLTQLIQQ SSNPPKIMVS GSAVGYYGRH
DDKLLDESSG AHVEFSHDIC RKWEQEALNA NTEHTRVCII RIGIVLGKGG ALEKMLPPFK
LGLGGPIGHG RQGMSWIHVQ DLISLIDFLL TQEHCKGVFN ATAPNPVSNA VFTKALGKAL
NRPALITTPP LALRLAMGEM SELLTEGQFV YPKRALEAGF QFQFSDLDNA LTDVLAK