| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2701 |
|---|
| Symbol | |
|---|
| ID | 5370860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 3234708 |
|---|
| End bp | 3235625 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640830929 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001366898 |
|---|
| Protein GI | 153001217 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1092] Predicted SAM-dependent methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000560458 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAGTT TTATACAAGC GCTAGCGACA ATTGAATTGG GTGATGATGC AGTGCGGTTG
TTCCACGGCC GCGGAGGACA CTACGCGGGT TGTGAACACC TATGTTTAGA TTGGTTTACG
CCAGTGCTAT TGCTGACCAG TTTCACTCCC TTAGCCGATG ACGATTTAGC CACATGCCAG
CAGGCCATTG CGGCGCGTTG GCAGGCCATT CGTCCCGATA GCCAACTGAA TTTAGTCTAC
CAATACCGCA GTGCGGGCGA GACCTTTACT CAAGTGCTGC AAGGCGAAGT GCCTGAGCCG
CATATTGTTA GTGAAAATGG CGCACGCTTT CAGGTGCATT TAATGCGCGG ACAAAACCAC
GGTTTATTCC TCGATATGGC TAACGGTCGC GAGTGGGTGA GAGCAAATGC CCGCTATAAA
AAAGTGCTTA ATTTGTTTGC CTATACCTGT GGTTTCTCGG TGGCGGCATT GCAAGGCGGC
GCCGATGAAG TGGTCAATAT GGACATGAGC AAAGGCGCAT TGGGCATAGG TAAACAGAAT
CATTTGCTGA ATGGCTTTAG TGCGGGAGCA CGTTTTTTAG GCCATGATAT TTTTAAATCT
TGGGGCAAAC TGAAAAAGCT CGGTCCCTAC GAGATTATTG TGGCCGATCC ACCGAGCAAT
CAGAAGGGCA GTTTTGTCGC GACTAAGGAT TATGTACGTT TAATCAGGCG TTTACCTGAG
TTACTTGCCG ATAATGGTGA AGTGTTACTC TGCCTCAATG CACCCGAGCT CGATACCACT
TTCCTACGCC AGCAGGTCGC AGATGCGGCG CCAGCACTCG AATACATAGA GCGCTTAGCC
AATCCGCCAG CGTTTATGGA TGTGTCTGAA GAGAAGTCGC TTAAGGTACT GCGTTATCGT
TTATCGGCTC AAACCTAG
|
|---|
| Protein sequence | MQSFIQALAT IELGDDAVRL FHGRGGHYAG CEHLCLDWFT PVLLLTSFTP LADDDLATCQ
QAIAARWQAI RPDSQLNLVY QYRSAGETFT QVLQGEVPEP HIVSENGARF QVHLMRGQNH
GLFLDMANGR EWVRANARYK KVLNLFAYTC GFSVAALQGG ADEVVNMDMS KGALGIGKQN
HLLNGFSAGA RFLGHDIFKS WGKLKKLGPY EIIVADPPSN QKGSFVATKD YVRLIRRLPE
LLADNGEVLL CLNAPELDTT FLRQQVADAA PALEYIERLA NPPAFMDVSE EKSLKVLRYR
LSAQT
|
|---|
| |