Gene Shew185_2656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2656 
Symbol 
ID5370200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp3163748 
End bp3164371 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content53% 
IMG OID640830880 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001366854 
Protein GI153001173 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0662609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGATT TTGCCTTACT CGCAGTGTTT ATCCCGACCT TCTTCTTTGT TTCTATCACC 
CCGGGCATGT GCATGACGCT CGCCATGACA CTGGGCATGA GCATAGGTGT GCGCCGCACC 
CTGTGGATGA TGCTGGGTGA ACTGGTAGGC GTGGCGTTAG TGGCGACAGC CGCAGTGATG 
GGCGTTGCCA GTATCATGCT CAACTATCCC GAAGTCTTTC AAATCTTTAA ATGGGTTGGC 
GGGATTTATT TAGGCTTTAT CGGCGTACAA ATGTGGCGCG CCCGCGGTAA GATGGCCATG 
TTAAGCGATG ACGACACTAA CCCCAGAGCC AGCAATGTTA CCTTGATATC CCAAGGCTTT 
ATTACCGCCA TTGCCAATCC TAAAGGTTGG GCATTTATGG TGTCGCTGCT GCCACCTTTT 
ATCAATGCCG AGCGCGAAGT TGCGCCGCAG CTGCTCGCGC TGCTGAGCAT TATTATGGTG 
ACCGAGTTTA CCTCTATGCT CGCCTACGCC AGCGGCGGCA AAAGCCTGCG TATTTTCCTA 
AGCCGCGGCG ATAATATTCG CTGGTTAAAC CGCATTGCAG GCAGCCTGAT GATAGGCGTG 
GGCGTGTGGT TAGCCATGAG CTAA
 
Protein sequence
MPDFALLAVF IPTFFFVSIT PGMCMTLAMT LGMSIGVRRT LWMMLGELVG VALVATAAVM 
GVASIMLNYP EVFQIFKWVG GIYLGFIGVQ MWRARGKMAM LSDDDTNPRA SNVTLISQGF 
ITAIANPKGW AFMVSLLPPF INAEREVAPQ LLALLSIIMV TEFTSMLAYA SGGKSLRIFL 
SRGDNIRWLN RIAGSLMIGV GVWLAMS