Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2599 |
Symbol | uvrC |
ID | 5372860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3099613 |
End bp | 3101442 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640830815 |
Product | excinuclease ABC subunit C |
Protein accession | YP_001366797 |
Protein GI | 153001116 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00115318 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAATG AATTTAACGC CCAAAGTTTT TTACGTACGG TTTCATCCTC CGCTGGGGTT TATCGCATGT ATGACGTCAA GAATGACGTC ATTTATGTGG GTAAAGCCAA AGATCTCAAA AAACGGCTTA CCTCGTATTT TCGTAAAAAC CTCGCTAATG TTAAGACCCA AGCCTTAGTC TCGCATATAC ACCATATTGA TGTGACGCTG ACCCACAGCG AAACCGATGC TCTGTTGCTT GAGAATGATT ACATCAAGCA ATACATGCCC AAATACAATG TGTTATTGCG TGATGACAAA TCTTATCCTT ACATACTGTT AAGCCAGCAC GAACACCCAA GGCTTGCTTA TCATCGTGGT CCGCAGCGGG AAAAAGGCCA CTATTTTGGC CCTTATCCTA ACGGCGGCGC CGTGCGTGAA AGCCTGCATT TAATGCAGAA GCTGTTTCCA ATTCGTCAAT GTGACGACCT TTACTACAAG TCTCGCTCAC GCCCCTGTTT ACAATATCAA CTTTCCCGTT GTAGCGCGCC CTGTGTGGGT AAAGTCAGCA ACGCCGATTA CGACGAGCAA GTGAAACTCG CCAGCCTGTT TTTAAAGGGC AAAGATCAGC AAGTGATCAG CGCCTTGGTT GACAAAATGG AGCTTGCGGC CGAGCGACAA GCCTATGAGC AAGCTGCACG ATTTCGCGAT CAAATTATGG CGCTGCGTAA AGTCGCCGAA CAACAGGAAG TATCGAATAA TAAAGGCGAT ATGGATGTCA TCGGTGTGCA TTATTCGTCG GGCATCGCTT GTTTCCATTT GCTGTTTATC CGCGAGGGTA AAATCTTTGG CAGTCGCAGC TATTATCCTT CTGTACCCGC CCAAACCGAT ATGGACGAAG TGCTGCGCTC TTTCATCCTG CAGTTTTATT TAAATGCGGA TATTCAACGC ACGATCCCAA AGGAAGTGGT GATTAGCCAC AACTTTGAAG AATTACATGA ACTTGAAGCG GCGGTTTCTG AGGCGCTAGA TAAAAAGTTT TCGATTAAGA CCAATGTGCG CGCCGACAGG GCAAGCTTCT TGCGGTTAGC GGTGACCAAT GCGACGAATG CCGTGGTTAC GCGCTTGTCC CATAAAAATA CGGTCGAGCA GCGTTTTGTG TTACTCGAAG AAATCCTTGA ATTGAGTACG CCTATTCAAC GGATGGAATG TTTTGATATC AGTCATACCA TGGGGGAGAG CACGGTTGCC TCCTGTGTGG TGTTCAATCG GGAAGGGCCG CATAAAGGTG AATATCGTCG CTATAATATC GAGGGTATTA CACCGGGCGA TGATTACGCG GCAATGAAGC AAGCGGTGAG CCGACGCTTC GATAAGATTG AGGCGGGCGG TAAAATCCCT GACATTCTGT TTATCGATGG TGGACTCGGG CAGTTGCGTA TCGCCCAGAA AATAGTGGAT GAAAAGTTTG TCCATTTAGA TAAAGCACCG CAGCTCATTG GGGTGGCGAA AGGCGAGGGC CGTAAACCTG GGCTCGAAAC CTTAATCTTA GGGGATACCG AAACAAGCTT TTCCCTCGAA GGTGATTCGC CTGCGTTGCA CCTTATTCAA CATATTCGCG ATGAGTCCCA TCGATTCGCG ATAACAGGCC ATCGTAATCG TCGCCAGAAA ACCCGCAATA CTTCCACATT GGAATCTATT CCAGGAATTG GCCCTAAACG CCGTAAAGCT TTGTTACAGC ATTTAGGTGG GTTGCAAGAA GTGAAAGGGG CAAGTGTGGC GGAATTAGTC AAAGTACCAG GGATCAGCAT AGAAATGGCA CAAACCATTC ATGATGCATT GCGAGGGTGA
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Protein sequence | MSNEFNAQSF LRTVSSSAGV YRMYDVKNDV IYVGKAKDLK KRLTSYFRKN LANVKTQALV SHIHHIDVTL THSETDALLL ENDYIKQYMP KYNVLLRDDK SYPYILLSQH EHPRLAYHRG PQREKGHYFG PYPNGGAVRE SLHLMQKLFP IRQCDDLYYK SRSRPCLQYQ LSRCSAPCVG KVSNADYDEQ VKLASLFLKG KDQQVISALV DKMELAAERQ AYEQAARFRD QIMALRKVAE QQEVSNNKGD MDVIGVHYSS GIACFHLLFI REGKIFGSRS YYPSVPAQTD MDEVLRSFIL QFYLNADIQR TIPKEVVISH NFEELHELEA AVSEALDKKF SIKTNVRADR ASFLRLAVTN ATNAVVTRLS HKNTVEQRFV LLEEILELST PIQRMECFDI SHTMGESTVA SCVVFNREGP HKGEYRRYNI EGITPGDDYA AMKQAVSRRF DKIEAGGKIP DILFIDGGLG QLRIAQKIVD EKFVHLDKAP QLIGVAKGEG RKPGLETLIL GDTETSFSLE GDSPALHLIQ HIRDESHRFA ITGHRNRRQK TRNTSTLESI PGIGPKRRKA LLQHLGGLQE VKGASVAELV KVPGISIEMA QTIHDALRG
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