Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2589 |
Symbol | |
ID | 5372901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3088229 |
End bp | 3089326 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640830801 |
Product | NlpB/DapX family lipoprotein |
Protein accession | YP_001366787 |
Protein GI | 153001106 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3317] Uncharacterized lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000786749 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAGA AAGTCACCCC ACTGATCTTA GTTGCTGCCG TTGCAGCCTG TAGTTCGCCA CTCGATCGCC GTCAAGCGAA TGGTACTGAA GACTATGTTC AGGCTGAGCA AGCGCCTTTA CTTAAGATCC CAGCCGGATT AAAAACACCG CCCTACAATA AAGAATTTGA TGTGCCAGCA TTGGGCCCTA AAGCCAATGC GACTGTCTAC GGTAAAAATT TGGATATCCG TCCGCCACTG CAAGTACTGC CTATGGCTGA AGGTACTCAC GTGGAAGAGG GCAGCGACAA CATTAAAATC GTGGTCGAAT CTATCGACAA TACAGTGGAC TTGAAACAAG AAATCTTTAG CAACTTAGAT GGTTTCTTGG CCCAAAAAGG TATCGCTGTT CGTAGCCGTG ATTTTGATAA AGGCAACATA GAAACCGATT GGATCGAAAG TCGCGAAGTA ATCGAATCAA ACATGTGGGG TTCAGATAAA GTTTATCTGC TGCGCCAACG TTACCGTTTC GATGTGGAAA CACGTCCACA TGGCCGCACT GCCAATATCG TTATTCACTT AGTTGAACAC GAAGAGTTTT ACGACGATAA AGCACAAGAC GTGTTATTAA GCGGCGAAGA TAAGCAAAGA TACACGATTG ATATGCTGAA CAGTGCGATT GCCTACATCA GCGTTAAACG TGACCAATCT ATTCAAGCGA ATCGTTTGAA GCAAACCTTA GGTATCAATG TTGACTTAGT CACGCCAGAA GAAGGCAAAG CCTACTGGTC TGCTAAAGCC CCGTACAAAC AAGTGTGGGA TCGTCTGCGT ATCGTGCTGC CAGAAATGGG CTTCGAAATT GCCGATATGG ATAGCGCGAA AGGATTGTAC TTTATCAAGT TTGACGATAA CTCAGGTTTC TGGAGTTCAT TGTGGGGCGA AGATAAGTTA GCGCTAAAAG AAGGCAGCTA CCGTTTACTG CTTGAAGATG GCGATACGCC TGAAGACACT AAGATCTTCC TCCGCGATGC TGAAGATCAG CCATTGAGCG ATGAAGTCGT TACCAATGTG TATCAGTCAC TGTCAAACCT GATGAAAGAA GAACGCAAAC TGCGTTAA
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Protein sequence | MLKKVTPLIL VAAVAACSSP LDRRQANGTE DYVQAEQAPL LKIPAGLKTP PYNKEFDVPA LGPKANATVY GKNLDIRPPL QVLPMAEGTH VEEGSDNIKI VVESIDNTVD LKQEIFSNLD GFLAQKGIAV RSRDFDKGNI ETDWIESREV IESNMWGSDK VYLLRQRYRF DVETRPHGRT ANIVIHLVEH EEFYDDKAQD VLLSGEDKQR YTIDMLNSAI AYISVKRDQS IQANRLKQTL GINVDLVTPE EGKAYWSAKA PYKQVWDRLR IVLPEMGFEI ADMDSAKGLY FIKFDDNSGF WSSLWGEDKL ALKEGSYRLL LEDGDTPEDT KIFLRDAEDQ PLSDEVVTNV YQSLSNLMKE ERKLR
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