Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2586 |
Symbol | |
ID | 5372880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3081578 |
End bp | 3083491 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640830798 |
Product | heat shock protein 90 |
Protein accession | YP_001366784 |
Protein GI | 153001103 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0326] Molecular chaperone, HSP90 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000082742 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACAAC AAGAAACTCA TGGTTTTCAA ACAGAAGTCA AACAGCTGTT GCATTTGATG ATCCATTCTT TGTATTCCAA CAAAGAAATT TTCTTGCGTG AACTGGTCTC CAACGCTGCG GATGCAGCGG ACAAGCTGCG TTATCTGGCG TTGACCAATG ACGCTCTGTA TGAAGGCGAC GGTGAACTGC GAGTCCGTAT CAGTGCGGAT AAAGAAAAAG GCACTGTGAC CATCGAAGAC AACGGCGTGG GTATGACCCG CGACGGCGTG ATTGAGCATT TAGGCACAAT TGCTAAGTCG GGCACCGCTG ATTTCTTTAA GAATCTATCG GGCGAATCTT CAAAGGATTC ACAGTTAATC GGCCAGTTCG GTGTCGGTTT CTATTCAGCC TTTATCGTGG CCAAGAAAGT CACGGTTCGC ACTCGCGCTG CCGGTCATAA GGCCGATGAA GCCGTATTGT GGGAATCAGA AGGCGAGGGT AACTTCACCG TTGATACCAT CACTAAGGCG AGCCGTGGTA CTGAAATCAC GCTGCACCTG CGTGATGAAG AAAAAGAATT TGCCGATGAT TGGCGCCTGC GCTCGATCAT CACTAAATAC TCAGATCATA TTTCTGTGCC GGTCGAAATG TGGCAAGAGG GTACGCCAGA AAGTGATGGT GCTGATGGCG AAAAAATTCC TGCGACCGAA GGTCAATGGA AAGTCATGAA CAAAGCGACT GCTTTGTGGA TGCGCAGCAA AGCTGACATC AGTGACGAAG AGTATCAAGA GTTTTACAAA CACATTTCCC ACGATTATAC CGACGCACTA CTGTGGAGTC ATAATCGGGT AGAAGGTAAG CAAGAATACA CTAACTTATT GTATATTCCT GCCAAAGCGC CTTGGGATAT GTGGAACCGC GACCGTAAGC ACGGCCTGAA ACTGTTTGTG CAACGTGTGT TCATCATGGA TGACGCTGAG CAATTTATGC CATCTTATCT GCGCTTCGTG CAGGGCTTAA TTGACTCAAA CGATTTGCCG CTGAACGTAT CCCGCGAAAT TCTGCAGGAT AACCATGTGA CCAAAGCGAT GCGTACTGGT ATCACCAAAC GTGTGCTTGG CATGCTGGAA AAACTGGCGA AAGACGATGC GGAAAAATAT CAACAGTTCT GGGCTGAATT TGGCCAAGTG TTGAAAGAAG GGCCTGCGGA AGATTTCGCC AACCGTGAAC GTATCGCAGG CTTATTACGT TTTGCCTCGA CCCATACGGG CAGTGCTGCG CCGACTGTGT CACTCGATGA CTACATCAGC CGCATGAAAG AAGGCCAAAC TAAGATTTAT TATATCGTTG CCGACAGCCA TGAAGCCGCC GCTAACAGCC CACATTTAGA GTTGTTACGT AAGAAAGGCA TCGAAGTCTT ACTGATGTCA GAGCGTATCG ACGAGTGGCT AATCAACCAC TTAACTGAGT ACAAAGAGAA ACAACTGCAC TCAGTGACCC GTGGTGATTT AGAACTTGGC GAGCTGGAAG ATGCCTCTGA AAAAGAAGCG CAAGAAAAGC TTGAGCAAGA ATCGGTAGCT TTAGTTGAAC GCATTAAAGC GGCATTAGGC TCGACTGTTG CGGATGTGAA AGTCACGTCA CGCTTAACCG ACACCCCAGC CTGTGTAGTG GCGGGTGAAG GCGAAATGTC GACTCAGATG ATCAAGCTGA TGCAAGCTGC CGGTCAACCT GTACCAGAAG TGAAGCCAAC ATTTGAGATC AACCCAGCGC ACCCATTAGT GTCGCGCTTA AATGATCTTC AAGATGAAGC CGCCTTCGCG GATTGGTCAA ATCTGCTGCT GCAACAGGCT CAATTGTCTG AAAAAGGTAG CCTTGCGGAT CCATCGGCCT TTATCAAGCT GATGAACCAA ATGTTACTAG CTAACATGAA GTAA
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Protein sequence | MSQQETHGFQ TEVKQLLHLM IHSLYSNKEI FLRELVSNAA DAADKLRYLA LTNDALYEGD GELRVRISAD KEKGTVTIED NGVGMTRDGV IEHLGTIAKS GTADFFKNLS GESSKDSQLI GQFGVGFYSA FIVAKKVTVR TRAAGHKADE AVLWESEGEG NFTVDTITKA SRGTEITLHL RDEEKEFADD WRLRSIITKY SDHISVPVEM WQEGTPESDG ADGEKIPATE GQWKVMNKAT ALWMRSKADI SDEEYQEFYK HISHDYTDAL LWSHNRVEGK QEYTNLLYIP AKAPWDMWNR DRKHGLKLFV QRVFIMDDAE QFMPSYLRFV QGLIDSNDLP LNVSREILQD NHVTKAMRTG ITKRVLGMLE KLAKDDAEKY QQFWAEFGQV LKEGPAEDFA NRERIAGLLR FASTHTGSAA PTVSLDDYIS RMKEGQTKIY YIVADSHEAA ANSPHLELLR KKGIEVLLMS ERIDEWLINH LTEYKEKQLH SVTRGDLELG ELEDASEKEA QEKLEQESVA LVERIKAALG STVADVKVTS RLTDTPACVV AGEGEMSTQM IKLMQAAGQP VPEVKPTFEI NPAHPLVSRL NDLQDEAAFA DWSNLLLQQA QLSEKGSLAD PSAFIKLMNQ MLLANMK
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