| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2508 |
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| Symbol | sucA |
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| ID | 5371201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2994140 |
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| End bp | 2996971 |
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| Gene Length | 2832 bp |
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| Protein Length | 943 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640830721 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_001366708 |
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| Protein GI | 153001027 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00264339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCAAG GCATCATGAA AGCCTGGCTC GAATCATCTC ACTTAAGTGG TGCAAATTCG
ACCTACGTAG AAGAGATGTA TGAAGCCTAT CAAGAAGACC CACAGTCAGT CGCTGATGAT
TGGCGTGCGG TATTTGATAA TCTCCCTCCT GTGAACGGTG CCTCTGTTGA TGCGCCTGAA
GCTGCTCACT CAAAAGTACG TGATTATTTT CGCAGTTTAG CGTTAGAAGG ACGCCATAAG
AGCTCTGCTC GTGTGACGGA TCCTGAAATG GATGCTAAGC AAGTTAAAGT CCTGCAGTTA
ATTAACGCCC ATCGTTTCCG TGGCCATCAA GGTGCTAACC TTGATCCGCT TGAACTGTGG
AAACGCGAAC CCGTTGCTGA TTTAGATCCT GCCTTCCACG GCCTGACTAA AGAAGACATG
GATCGTGAGT TTAATACAGG TTCTTTTGCT CATGGTGGCG AAACCATGAA GCTCGCGGAT
TTGGTAAAAG CGCTGAAAGC CACCTACTGT GGTTCTATCG GTGCTGAATA TATGCACATC
ACCGATACCG ATGAGAAACG CTGGATCCAA CAACGTCTCG AACCTTCCTT AGGTAAAGCT
AACTACGATA AAAGTGTTAA GACACGCATT CTTGAAGGCT TAAACGCCGC AGAAGGCATT
GAAAAATACT TAGGTGCTAA ATTCCCTGGT GCGAAACGTT TCTCGTTAGA AGGCGGCGAT
GCGTTAGTGC CTATGATGCG CGAAATTATT TATCGTGCAG GTGAAGCGGG TACTAAAGAA
ATCGTCGTTG GTATGGCTCA CCGTGGTCGT CTGAACGTGT TAGTGAACGT ATTGGGTAAG
CGTCCTGCTG AACTGTTTGA CGAGTTCGCG GGTAAGCATG CTGATACCCA CGGTTCGGGT
GACGTTAAGT ACCACCAAGG TTTCTCCTCT GATTTCGAAA CGCCGGGCGG CAATGTGCAT
TTAGCACTGG CCTTTAACCC ATCGCACCTT GAAATCGTTA ACCCTGTGGT GATTGGTTCT
GTACGTGCTC GTCAAGACCG TCGTGGTTGT AAGGATGGCT TACAAGTCAT GCCTATTACT
ATTCACGGTG ACTCAGCCAT TGCAGGTCAA GGGATAGTAC AAGAGACATT CAACATGTCT
CAAACTCGCG GTTTTACCGT CGGCGGCAGC ATTCGCATCG TAGTGAACAA CCAAGTGGGT
TTCACTACGT CTAACCATGC GGACACTCGC TCGACTGAAT ACTGTACTGA CATCGCTAAG
ATGGTTCAGG CACCGATTTT CCACGTTAAC TCTGATGATC CAGAAGCCGT TGCTTTTGTG
TCGCAGTTAG CCGTTGATTA TCGTAACGAG TTCAAACGTG ATGTGGTGGT TGAATTAGTC
TGTTATCGCC GTCATGGCCA TAACGAAGCC GATGAGCCAA GTGCAACTCA GCCGCTGATG
TATGCCAAGA TCAAGAAACA CCCAACGCCA CGTAAGATTT ATGCAGATAA GCTAATCGCT
GAAAACGTGA TGGCTGCTGA TGATGTGACT GGTCTTATCA ATAATTACCG TGATGCATTA
GATCAAGGTG ATTGTGTGGT GAAAGAATGG CGCCCAATGA CGCTGCATTC TGTTGACTGG
ACACCGTATA TCGGTCGTGA GTGGGACGAA GCTTATCAGG CATCTATGTC GGCTGAGCGT
TTACAAAGTC TTGCTGACAA AATGAGTTAT GTGCCTGAAA GCCATCCATT GCAATCACGC
GTAGCTAAGA TTTATAGCGA CCGTTTAGCG ATGGCGAAAG GCGAGAAACC ACTCGATTGG
GGCTTTGCAG AAACCTTGGC TTATGCCTCG ATTCTGGAAG ACAACAAGCG TGTACGTATT
ACGGGTCAAG ATTCTGGCCG TGGCACTTTC TTCCATCGTC ATGCGGTATT GCACAATCAA
AACGATGGCA CGACTTACAT GCCACTGCGC AACATCGCCG ATGAGCAAGG CCCAGTTGAT
ATTACTGACT CAGTATTATC TGAAGCCTCA GTGCTGGCAT TTGAGTATGG TTATGCGACA
GCAGAACCCG GCGGCCTGAC CATTTGGGAA GCGCAGTTTG GTGACTTTGC TAACTGTGCT
CAAGTGGTTA TCGACCAGTT CTTGTCATCG GGTGAGCAGA AGTGGGGCCG TTTATGTGGT
CTGACTATGC TGTTACCCCA TGGCTATGAA GGTCAAGGCC CTGAGCATTC AAGCGCCCGT
TTAGAGCGTT TCTTGCAAAT GTGTGCTAAC CACAACATGC AAGTGTGTGT GCCATCTACG
CCGGCACAGG TTTACCATAT GTTGCGCCGT CAAGTGGTGC GTCCTATGCG TCGACCACTC
ATCGTTATGT CGCCTAAATC ATTGCTACGT CATCCATTAG CGGTTTCAAG CTTGGACGAT
TTAGCCAGTG GTAGTTTCCA AAACGTGATC GGTGAAATCG ATACGTTGGA AGCGAGCAAG
GTTGACCGCG TTGTCTTCTG TAGTGGCAAA GTGTACTTCG AGCTACTGGA AAAACGTCGT
AGAGAAAATA TCACTAACGT AGCGTTAATC CGTGTCGAAC AGTTATATCC GTTCCCACAT
GATGAAATGA TCGTTGCTTT GGCTGATTAC CAACATGTTA AAGATTTTGT TTGGTGTCAG
GAAGAGCCAC AGAACCAAGG TGCTTGGTAC TCTAGTCAAC ACCATTTCTG GGCCGCGGTT
CCTGCAGGTG CACAGTTAAC TTATGCCGGT CGTGAAGCGT CAGCTGCACC AGCATGTGGT
TACCCTGAGT TGCACGCACA TCAGCAAGAA TCTTTAGTGA ACAGTGCCCT GAAACTTACA
ATCACACTGT AG
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| Protein sequence | MHQGIMKAWL ESSHLSGANS TYVEEMYEAY QEDPQSVADD WRAVFDNLPP VNGASVDAPE
AAHSKVRDYF RSLALEGRHK SSARVTDPEM DAKQVKVLQL INAHRFRGHQ GANLDPLELW
KREPVADLDP AFHGLTKEDM DREFNTGSFA HGGETMKLAD LVKALKATYC GSIGAEYMHI
TDTDEKRWIQ QRLEPSLGKA NYDKSVKTRI LEGLNAAEGI EKYLGAKFPG AKRFSLEGGD
ALVPMMREII YRAGEAGTKE IVVGMAHRGR LNVLVNVLGK RPAELFDEFA GKHADTHGSG
DVKYHQGFSS DFETPGGNVH LALAFNPSHL EIVNPVVIGS VRARQDRRGC KDGLQVMPIT
IHGDSAIAGQ GIVQETFNMS QTRGFTVGGS IRIVVNNQVG FTTSNHADTR STEYCTDIAK
MVQAPIFHVN SDDPEAVAFV SQLAVDYRNE FKRDVVVELV CYRRHGHNEA DEPSATQPLM
YAKIKKHPTP RKIYADKLIA ENVMAADDVT GLINNYRDAL DQGDCVVKEW RPMTLHSVDW
TPYIGREWDE AYQASMSAER LQSLADKMSY VPESHPLQSR VAKIYSDRLA MAKGEKPLDW
GFAETLAYAS ILEDNKRVRI TGQDSGRGTF FHRHAVLHNQ NDGTTYMPLR NIADEQGPVD
ITDSVLSEAS VLAFEYGYAT AEPGGLTIWE AQFGDFANCA QVVIDQFLSS GEQKWGRLCG
LTMLLPHGYE GQGPEHSSAR LERFLQMCAN HNMQVCVPST PAQVYHMLRR QVVRPMRRPL
IVMSPKSLLR HPLAVSSLDD LASGSFQNVI GEIDTLEASK VDRVVFCSGK VYFELLEKRR
RENITNVALI RVEQLYPFPH DEMIVALADY QHVKDFVWCQ EEPQNQGAWY SSQHHFWAAV
PAGAQLTYAG REASAAPACG YPELHAHQQE SLVNSALKLT ITL
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