Gene Shew185_2498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2498 
Symbol 
ID5370636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2985584 
End bp2986531 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content45% 
IMG OID640830711 
Productmagnesium and cobalt transport protein CorA 
Protein accessionYP_001366698 
Protein GI153001017 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0365277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACTG CTTATGTGTA TGAAAATCGT CACCTTACCG TGACAGAGCT CGGCATACTG 
GACAGTATTC CCGCATCGAC CATTTGGTTA GATCTGTATA AACCCGATGA TTCGGAGCGA
GAATGGTTAA GTCATTTTTC TGTTGAAGAA GTGCCTGACG AAGAAGATAT CAATGAAATT
GAGGCCTCGG CACGTTTTTA TCAAAACAGC GATGGCCTGC ATATCAATTC GTTATTCCCC
CAGCGTGTCG GCCAAGATGT GCGTGGCGTT AACGTGTCCT TCAACCTTCG CACCAATTTT
TTACTGACAA TCCGTGAAGA AGACGTGGGT CTTATCCGCT TGCTGCGTAA CTATTTACGT
TTGGGCCGGT TAGATGTGTC GACGCCGCAG GAACTGTTTC TCGAATTATT TAATCTGAAA
GTGGATTATC TGTCTGACTT AATCGAAGAC GTTTACACAG TTCTCGAAAA TGTCGGTGAG
CAAGTATTTG ATAACGATGA GCTTGATGAT GTATTTAAGC TTATCACTCT GCAAGAGGAC
TCCAATGGTA AAATCCGTTT GAGTTTGCTC GATACCCAGC GTTCACTGCG TTATATGCAG
CGTTACTATC GTGGCCAGCT ATCCGATGAG CACTTGAAGG ACTTGCGGGA AATGTTGTCG
GATATCGAGT CGCTGATGCC CCACAGTCAG TTTATTTTCG ATAAGTTAAA CTTTTTGCTT
GATGCGGCCA TGGGTTTCAG TGGTCTACAA CAGAACAAAA TCATTAAAAT CTTCTCGGTT
GCCGCTGTGG TGTTTCTGCC GCCGACCTTG ATTGCCAGTA GTTATGGGAT GAACTTTACC
AGTATGCCTG AGCTTGAGTG GCAATACGGT TACCCTATGG CGATTGTGAT GATGTTAGCC
AGTGCCGCCG GTACTTACTT CTTCTTTAAG CGTAAGCATT GGTTATAA
 
Protein sequence
MITAYVYENR HLTVTELGIL DSIPASTIWL DLYKPDDSER EWLSHFSVEE VPDEEDINEI 
EASARFYQNS DGLHINSLFP QRVGQDVRGV NVSFNLRTNF LLTIREEDVG LIRLLRNYLR
LGRLDVSTPQ ELFLELFNLK VDYLSDLIED VYTVLENVGE QVFDNDELDD VFKLITLQED
SNGKIRLSLL DTQRSLRYMQ RYYRGQLSDE HLKDLREMLS DIESLMPHSQ FIFDKLNFLL
DAAMGFSGLQ QNKIIKIFSV AAVVFLPPTL IASSYGMNFT SMPELEWQYG YPMAIVMMLA
SAAGTYFFFK RKHWL