Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2441 |
Symbol | |
ID | 5370458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2916674 |
End bp | 2917306 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640830654 |
Product | putative solute/DNA competence effector |
Protein accession | YP_001366641 |
Protein GI | 153000960 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3109] Activator of osmoprotectant transporter ProP |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.254744 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGAAT CAACAGAAAA GTTGACCGAC ACCAATGCAA TTTTGGCGTA TTTGTATGAA ACATTTCCTT TGTGCTTTAT TGCTGAAGGT GAAACTAAGC CATTAAAAAT CGGATTGTTT CAAGATTTGG CTGAAAGGTT GGCTGATGAT TCTAAAGTCA GTAAAACTCA GCTCAGAGTT GCCTTAAGAC GTTACACCAG CAGCTGGCGC TATTTGAAGT GCGTTAAAGC GGGCGCACAA CGCGTTAATC TGGATGGCGA ACCTTGCGGC GAGTTAGAGC AAGAGCACAT TGACCATGCT CAAGCCATGT TGAAAGAGAG TCAGGATAAA GCGAAAGCGA AACGTGCAGC ACTCGCACCT AAGCCTGCGG CGAAGAAAGC ACCTAAAAAG GTGGCTGTTC CTCAACGTGC TAAAACTGAG CGTCCTGCTA AGCCTGCGCC TAAAGCTGCA GCGCCAGTCG TAAATTATGT CCAAGCACAA TTGACTGATT TAACGAAAAA ACAACGCGTC AATGTTAAGT TAGGTATGAC ACCCGTAGCC GGTGTGATTA CTGATATTAA CAAGGAAGAT ATTCATGTTC AGCTTGATAG TGGCCTAACG ATTAAAGTTA GAGCAGAACA TATCCTGCTG TAA
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Protein sequence | MMESTEKLTD TNAILAYLYE TFPLCFIAEG ETKPLKIGLF QDLAERLADD SKVSKTQLRV ALRRYTSSWR YLKCVKAGAQ RVNLDGEPCG ELEQEHIDHA QAMLKESQDK AKAKRAALAP KPAAKKAPKK VAVPQRAKTE RPAKPAPKAA APVVNYVQAQ LTDLTKKQRV NVKLGMTPVA GVITDINKED IHVQLDSGLT IKVRAEHILL
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