Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2389 |
Symbol | |
ID | 5371998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2844922 |
End bp | 2845650 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640830603 |
Product | RNA methyltransferase |
Protein accession | YP_001366590 |
Protein GI | 153000909 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0565] rRNA methylase |
TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000450659 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAGTA ATATTCGAGT GGTTTTAGTG GGGACTTCGC ACCCCGGCAA TATTGGTTCC ACTGCCAGAG CGATGAAGAC TATGGGTCTG TCAAATCTGT ACCTTGCAGA ACCGCGTGTT GAACCCGATG GGCATTCCAT TGCATTAGCC GCGGGTGCAT CGGATATTCT GAAACATCTT GTGAAAGTGG ATTCACTTGC TGAAGCGATT GCCGATTGTA GTCTAGTGAT CGCAACCAGC GCGCGTAGTC GTACCTTAGA TTGGCCGATG TTAGAGCCAA GAGAAGCAGG GGTGAGATTA GCGACCGAGG CACTTAAAGG CCCCGTTGCA ATCGTGTTTG GCCGTGAGAA CCACGGGTTG AGCAATGAAG AGTTGCAACA GTGCACTTAT CATGTGGCGA TTCCTGCAAA TCCTGAATAC AGCTCGCTCA ATCTTGCGCA AGCAGTACAA ATCATTTGTT ATGAAACCCG TGTTGCCCAC CTCGCACAAA AAGAAGTGGC CGAAGAAGAG CTGACGGAGT ATCCCTTGGC GGCCGATCAG GAACGTTTCT TTGCACACCT TGAGACGACA CTGCTATCAA CCGGCTTTAT CATTAAGAAT CATCCCGGAC AAGTGATGAT GAAACTGCGC CGCTTGTTTA GCCGCGCACG GATTGAGAGT CAGGAGATGA ATATCCTCAG GGGTATTTTG ACCTCTATTG AGAAAGTGAC GGGTTCTAAA GACAAATAG
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Protein sequence | MLSNIRVVLV GTSHPGNIGS TARAMKTMGL SNLYLAEPRV EPDGHSIALA AGASDILKHL VKVDSLAEAI ADCSLVIATS ARSRTLDWPM LEPREAGVRL ATEALKGPVA IVFGRENHGL SNEELQQCTY HVAIPANPEY SSLNLAQAVQ IICYETRVAH LAQKEVAEEE LTEYPLAADQ ERFFAHLETT LLSTGFIIKN HPGQVMMKLR RLFSRARIES QEMNILRGIL TSIEKVTGSK DK
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