Gene Shew185_2387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2387 
Symbol 
ID5372092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2843247 
End bp2843708 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content45% 
IMG OID640830601 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001366588 
Protein GI153000907 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000199976 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTA CATCAAAAGG TCGTTATGCA GTAACCGCTA TGCTAGATGT GGCCATCCAC 
TCAGCATCGG GACCAGTTCC CTTAGCGGAC ATCTCTGAGA GACAAGGGAT TTCGCTTTCC
TATCTGGAAC AACTCTTCGC TAAGCTAAGA AAACACGGTT TAGTTGCCAG TGTACGTGGA
CCGGGCGGTG GTTATCGCTT AGGCCTAGAA GCCAATGATA TTTCAGTCGG CATGGTTGTC
CATGCTGTAG ACGAGTCTGT CGATGCGACT CGTTGCCAAG GACTTGGCAA TTGTCAGAGT
GGAACTCGCT GCTTAACCCA TTCACTTTGG GGCGATTTAA GCAAACAAAT TTCAGATTTT
TTAGATGGTA TCAGTCTTGC TGGCTTGATG CAGAAACGAG ATGTGCAATT TATCTCGCTT
AAGCAAGACA CTATGCAAAA GGAACAAAGA GTCAGTTTAT AA
 
Protein sequence
MKLTSKGRYA VTAMLDVAIH SASGPVPLAD ISERQGISLS YLEQLFAKLR KHGLVASVRG 
PGGGYRLGLE ANDISVGMVV HAVDESVDAT RCQGLGNCQS GTRCLTHSLW GDLSKQISDF
LDGISLAGLM QKRDVQFISL KQDTMQKEQR VSL