Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2336 |
Symbol | |
ID | 5372282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 2787626 |
End bp | 2789281 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640830550 |
Product | major facilitator transporter |
Protein accession | YP_001366537 |
Protein GI | 153000856 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTTCGA ATCATCAACA GGCTAATCAA AAAGATAGCC ATCAAGCTGT CACGCCTCAG ACGCAGCATT CATTCAAGCA ACAACCTGAG CTGAATTTCT GGCAAATTTT TAATATGTGC TTCGGTTTTT TAGGCATTCA ATTTGGTTTT GCCCTGCAAA ATGCTAACGT CAGCCGCATT TTCCAAACCT TAGGTGCATC TATCGATGAA ATCCCCATTC TGTGGATTGC CGCGCCGCTG ACGGGTTTAT TGGTTCAACC TATTATTGGT TATTTGAGTG ATAAAACCTG GGGACGCCTT GGCCGTCGCC GCCCTTATTT TTTGATTGGC GCGATTTTTA CCACTCTTGC TATTTTTATC ATGCCGCACT CGCCTACCCT GTGGATTGCC GCGGGCATGT TATGGATCAT GGATGCCTCG ATCAACATCG CCATGGAGCC GTTTCGCGCT TTCGTTGGTG ACAATTTACC GAAAAGCCAG CGTACCCAAG GCTATGCCAT GCAAAGCTTT TTCATCGGTA TTGGCGCTGT GGTCGCTTCG GCCTTACCCT ATATTTTGAC TCACTTTTTT GCTGTCGCGA ATACTGCACC AGCGGGTGAA ATTGCCGACT CAGTGCGTTA TGCCTTCTAT TTCGGTGGCG CAGTGTTATT GCTCGCGGTT ACTTGGACTG TCGTATCGAC AAGAGAATAT TCCCCCGAAG AGTTAGCCGC CTTTAACGCA AAACAAGTCG ATGCTGAGGA TGAAACCTTA GCTCGCACTC GTACCCGTAA GGATTATCAA TTTGCGTCCT TCGTGTGGAT GGGTCTCGGC GCCCTGCTCA CCTTCGCTAT TTGGGCGCAG GATTTAGATA AGCAACTGTA TATCTTAAGC TTAGGGATTT TTGCCTTTGG CCCATTGCAA CTGTATTGCG CGCTGCGTTT GGGCAATTCA CAACCCGCTG AACGCAATAA GCTCGGCATG GTATTTAGCG TGGTCGATGA CTTATTCCAT ATGCCCAAAG CCATGCATCA ACTGGCGATA GTGCAGTTTT TCTCTTGGTT TGCGTTGTTT GCCATGTGGA TTTACACCAC AGCAGCCGTG ACGTCTTACC ATTTTGGCAG TAGCGATGTG TTGTCCCAAG CCTACAACGA CGGCGCAGAT TGGGTCGGCG TGCTGTTCGC CTCCTACAAT GGTTTTGCCG CCATTGCCGC GATCTTTATT CCTATGCTGG CTAAGCGTAT CGGTATCAAA CTGACGCACA CAGTCAATAT GTTCTGTGGC GGTATATGCT TGATTAGCTT CTTCTTTATT AAAGACCCAA GCCTGTTATG GCTGCCTATG ATAGGTGTCG GTATCGCGTG GGCGTCAATA TTATCTGTGC CCTACGCCAT GTTGTCGGGC ATGTTACCCC CGCAAAAAAT GGGCGTTTAT ATGGGGATTT TTAACTTCTT CATCGTGATC CCGCAGCTTC TTGCCGCCAG TGTGCTGGGT TTAGTGCTCA ATGGTCTGTT CGATGGTCAA CCTATTTATG CGTTGATCAC AGGTGGCGTC TTGATGATGT GCGCTGGTAT TGCAGTACTT TTTGTTGAGC AAGAGATTGT GGATCAAAAT GACCAAAGCG CCGCCGTAAA TAGCAAAACC AACTTAACCA CAAAAGCCGC AGACAAAGTT AACTGA
|
Protein sequence | MSSNHQQANQ KDSHQAVTPQ TQHSFKQQPE LNFWQIFNMC FGFLGIQFGF ALQNANVSRI FQTLGASIDE IPILWIAAPL TGLLVQPIIG YLSDKTWGRL GRRRPYFLIG AIFTTLAIFI MPHSPTLWIA AGMLWIMDAS INIAMEPFRA FVGDNLPKSQ RTQGYAMQSF FIGIGAVVAS ALPYILTHFF AVANTAPAGE IADSVRYAFY FGGAVLLLAV TWTVVSTREY SPEELAAFNA KQVDAEDETL ARTRTRKDYQ FASFVWMGLG ALLTFAIWAQ DLDKQLYILS LGIFAFGPLQ LYCALRLGNS QPAERNKLGM VFSVVDDLFH MPKAMHQLAI VQFFSWFALF AMWIYTTAAV TSYHFGSSDV LSQAYNDGAD WVGVLFASYN GFAAIAAIFI PMLAKRIGIK LTHTVNMFCG GICLISFFFI KDPSLLWLPM IGVGIAWASI LSVPYAMLSG MLPPQKMGVY MGIFNFFIVI PQLLAASVLG LVLNGLFDGQ PIYALITGGV LMMCAGIAVL FVEQEIVDQN DQSAAVNSKT NLTTKAADKV N
|
| |