Gene Shew185_2336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2336 
Symbol 
ID5372282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2787626 
End bp2789281 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content48% 
IMG OID640830550 
Productmajor facilitator transporter 
Protein accessionYP_001366537 
Protein GI153000856 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCGA ATCATCAACA GGCTAATCAA AAAGATAGCC ATCAAGCTGT CACGCCTCAG 
ACGCAGCATT CATTCAAGCA ACAACCTGAG CTGAATTTCT GGCAAATTTT TAATATGTGC
TTCGGTTTTT TAGGCATTCA ATTTGGTTTT GCCCTGCAAA ATGCTAACGT CAGCCGCATT
TTCCAAACCT TAGGTGCATC TATCGATGAA ATCCCCATTC TGTGGATTGC CGCGCCGCTG
ACGGGTTTAT TGGTTCAACC TATTATTGGT TATTTGAGTG ATAAAACCTG GGGACGCCTT
GGCCGTCGCC GCCCTTATTT TTTGATTGGC GCGATTTTTA CCACTCTTGC TATTTTTATC
ATGCCGCACT CGCCTACCCT GTGGATTGCC GCGGGCATGT TATGGATCAT GGATGCCTCG
ATCAACATCG CCATGGAGCC GTTTCGCGCT TTCGTTGGTG ACAATTTACC GAAAAGCCAG
CGTACCCAAG GCTATGCCAT GCAAAGCTTT TTCATCGGTA TTGGCGCTGT GGTCGCTTCG
GCCTTACCCT ATATTTTGAC TCACTTTTTT GCTGTCGCGA ATACTGCACC AGCGGGTGAA
ATTGCCGACT CAGTGCGTTA TGCCTTCTAT TTCGGTGGCG CAGTGTTATT GCTCGCGGTT
ACTTGGACTG TCGTATCGAC AAGAGAATAT TCCCCCGAAG AGTTAGCCGC CTTTAACGCA
AAACAAGTCG ATGCTGAGGA TGAAACCTTA GCTCGCACTC GTACCCGTAA GGATTATCAA
TTTGCGTCCT TCGTGTGGAT GGGTCTCGGC GCCCTGCTCA CCTTCGCTAT TTGGGCGCAG
GATTTAGATA AGCAACTGTA TATCTTAAGC TTAGGGATTT TTGCCTTTGG CCCATTGCAA
CTGTATTGCG CGCTGCGTTT GGGCAATTCA CAACCCGCTG AACGCAATAA GCTCGGCATG
GTATTTAGCG TGGTCGATGA CTTATTCCAT ATGCCCAAAG CCATGCATCA ACTGGCGATA
GTGCAGTTTT TCTCTTGGTT TGCGTTGTTT GCCATGTGGA TTTACACCAC AGCAGCCGTG
ACGTCTTACC ATTTTGGCAG TAGCGATGTG TTGTCCCAAG CCTACAACGA CGGCGCAGAT
TGGGTCGGCG TGCTGTTCGC CTCCTACAAT GGTTTTGCCG CCATTGCCGC GATCTTTATT
CCTATGCTGG CTAAGCGTAT CGGTATCAAA CTGACGCACA CAGTCAATAT GTTCTGTGGC
GGTATATGCT TGATTAGCTT CTTCTTTATT AAAGACCCAA GCCTGTTATG GCTGCCTATG
ATAGGTGTCG GTATCGCGTG GGCGTCAATA TTATCTGTGC CCTACGCCAT GTTGTCGGGC
ATGTTACCCC CGCAAAAAAT GGGCGTTTAT ATGGGGATTT TTAACTTCTT CATCGTGATC
CCGCAGCTTC TTGCCGCCAG TGTGCTGGGT TTAGTGCTCA ATGGTCTGTT CGATGGTCAA
CCTATTTATG CGTTGATCAC AGGTGGCGTC TTGATGATGT GCGCTGGTAT TGCAGTACTT
TTTGTTGAGC AAGAGATTGT GGATCAAAAT GACCAAAGCG CCGCCGTAAA TAGCAAAACC
AACTTAACCA CAAAAGCCGC AGACAAAGTT AACTGA
 
Protein sequence
MSSNHQQANQ KDSHQAVTPQ TQHSFKQQPE LNFWQIFNMC FGFLGIQFGF ALQNANVSRI 
FQTLGASIDE IPILWIAAPL TGLLVQPIIG YLSDKTWGRL GRRRPYFLIG AIFTTLAIFI
MPHSPTLWIA AGMLWIMDAS INIAMEPFRA FVGDNLPKSQ RTQGYAMQSF FIGIGAVVAS
ALPYILTHFF AVANTAPAGE IADSVRYAFY FGGAVLLLAV TWTVVSTREY SPEELAAFNA
KQVDAEDETL ARTRTRKDYQ FASFVWMGLG ALLTFAIWAQ DLDKQLYILS LGIFAFGPLQ
LYCALRLGNS QPAERNKLGM VFSVVDDLFH MPKAMHQLAI VQFFSWFALF AMWIYTTAAV
TSYHFGSSDV LSQAYNDGAD WVGVLFASYN GFAAIAAIFI PMLAKRIGIK LTHTVNMFCG
GICLISFFFI KDPSLLWLPM IGVGIAWASI LSVPYAMLSG MLPPQKMGVY MGIFNFFIVI
PQLLAASVLG LVLNGLFDGQ PIYALITGGV LMMCAGIAVL FVEQEIVDQN DQSAAVNSKT
NLTTKAADKV N