| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2332 |
|---|
| Symbol | |
|---|
| ID | 5371991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 2784125 |
|---|
| End bp | 2785132 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640830546 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001366533 |
|---|
| Protein GI | 153000852 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1092] Predicted SAM-dependent methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.946528 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTATTC AAACGCTGTT ATCGACGGCT CTGGCGAAAC GCCATGATTT TTTACAACAA
GCAGAACAGG ATCAAACCGA TTGTTTTCGG GTGTTCCATG GCACAGTCGA AGGCGTGAGT
GGCTTGAATG TCGACCGTTA CGGCGATACT TGGCTAGTGC AGAGTTTTCA TCAGACCTTA
ACCGACGAAG AGTTAGCCGA TGTTAGTGCC GTTTTGCTGC AACAGGCCGA TTTGCCGATT
GTGTATAACG ACCGCTCATT AGGCAATTCC CGCGTATTGA ATGCGTTATC ACCGGCACTG
ACAGAGATCG CGAGTTCTGA GCGAGTCATG CAGGAAAATG GCATCAAGTT CAGCACTAAA
CTGCGTCACG AAGGACAAGA TCCGCTGTTA TTCCTCGATA TGCGCATTGG TCGTGAATAT
GTACGGGCAA ACAGCCAAGA TAAAACCGTG CTGAATTTGT TTTCCTACAC TTGCGGCATT
GGTACAGCGG CAGCCATCGG CGGCGCGACT CGGGTGATGA ACGTCGATTT TTCTTCCTTT
GCTTTAGCCA CGGGCAAGGC GAATGCGGCG TTAAATCAGG TGTCCAATGT GTGTGAGTTT
GTGCAGAGTG ATGCGTTTCC GGCATTGCGC CAATTGGCTG GTTTAAGTGT GGGAGGGCGA
CGCAATCAAA AATTACCGAG CTACCCAAAA TTGCCGCAAA CCCAGTTTGA TCTCGTGTTC
CTCGATCCGC CGCGTTATGC CAAGAGTGCT TTTGGTATTG TCGATTTGAT CAATGATTAT
CAAGGTTTGT TTAAGCCCGC ATTAATGGCG ACCAAAGTCG GCGGCACTAT CGTTTGCTGC
AACAATGTGG CGAAAGTTGA GCGCCAAGCA TGGTTTGACA GTTTAGTACG CTGCGTTGAA
AAACAAGGCC GCACAGTCAC AGCGCACACT TGGCTTGATC CCCATGAAGA TTTCCCTTCG
TTCGATGACA ATCATCCACT TAAAATTGTC GCGCTGACCT TAAGTTAA
|
|---|
| Protein sequence | MSIQTLLSTA LAKRHDFLQQ AEQDQTDCFR VFHGTVEGVS GLNVDRYGDT WLVQSFHQTL
TDEELADVSA VLLQQADLPI VYNDRSLGNS RVLNALSPAL TEIASSERVM QENGIKFSTK
LRHEGQDPLL FLDMRIGREY VRANSQDKTV LNLFSYTCGI GTAAAIGGAT RVMNVDFSSF
ALATGKANAA LNQVSNVCEF VQSDAFPALR QLAGLSVGGR RNQKLPSYPK LPQTQFDLVF
LDPPRYAKSA FGIVDLINDY QGLFKPALMA TKVGGTIVCC NNVAKVERQA WFDSLVRCVE
KQGRTVTAHT WLDPHEDFPS FDDNHPLKIV ALTLS
|
|---|
| |