Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2308 |
Symbol | |
ID | 5371636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2753167 |
End bp | 2755953 |
Gene Length | 2787 bp |
Protein Length | 928 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640830522 |
Product | diguanylate cyclase |
Protein accession | YP_001366509 |
Protein GI | 153000828 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00466975 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCTTGT GCAGCTGTTT TTTGAGTATA ACAGGGCAGG CAAGTCCATT GCCCGACGAG CCATTAATTG TGGTGATGGG GGAGGATAGC TTTCCCTATC AATATGTCGA CAACGATGGC GAGCCGACTG GACTACTGGT CGATTTATGG AAAGAGTGGG CGAAACAAAG CCATACCCAA GTGGTTTTTG TGGCGCGACA CTGGCACGAG TCCCTTGATC AACTGCGGCA AGGTAAGGCG CAAGTGCATA TCGGCATGGG GAAAACCCCA GAGCGTGAGC AAGAGTTCGA CTTTGCTGAG CCCATCGCCG ATGTCGGCAC TTTTTTATAT CTGCATAAAT CCCTGCAGGG TAAAAAGTCC ATTAAAGAAC TCATTCCCTT TCAAATTGGT GTGGTAGCTG CTTCATCTCA CGAGGCGGAA TTGCACCGTA TCGAACCTCA ACTCGTGTTT AAACGTTACG AAAGTCGTGA GAAATTACTT GCTGGGGTCG CAGCCGGCGA GATTATGGTG TTTGCGGGCT TAGAAGGTTA TTTGAAAGAT CCCGCTTCAT CCCAAGAGAT TGCCGCGAAT TATCCCAATA CGGCGCGTAT CCAAATTAAG GCGATGCAAT TTGTTCCTGC GGTCAAAAAG GGCAATCTCG ATTTAGTTGA TAGGATCAAT AAAGGTTTCA CCGCGCTCGA TCCGCACTTT ATCCAACAAA CGGAGCGACG ATGGCTTGGC TACCAACGTC AACAAGCTGG GATTGTTATT TCCATGCAAC TGGGCGCCGA GCCTTTTGTG GACTTAGGGG TCGATGGTTT ACCCCATGGC TTGTATGTGG ACATGTGGCA GCTTTGGTCT GAGAAGACCG GTATCGCCGT CGATTTTATT TCTGGCGATA TGAACTCCAG TGTGGATGAC GTTCGCCGAG GTCTTGCCGA TGCGCACATT GGTTATCCAG AGAGTGATGA TGTCAAAACG GGGCTTAATC GGGCTTGGCA CTTATATACG GTTAAGAGCC GCTTGTTTCT CTTTCAGCAG CAGTTGACCG ATTTAGACAG CTTAAAAGGT AAACGTATTG GGGTGGTGCC GACGGCGCCT TATCTGGTGG AGTTACGTAA AGCCTTACCC CAAATGGCAC TGCGCTATTA CGACAATATG GATGCCATGG TCGCGGGCGC AAGATCAGGC GAGATTGCTG GCTTTGTGGC TTCGGGTGCA TGGACATCCC ATTATTTACT GCTCAATAAA GGCTGGTCTG ACTTTAGCCA GTATCCCAAT CTCGAATTTA GCACCAACAT TTATGTGCTG ACTCGCAGTG ATGATCCAGG TCTGACGCAG CGGATCGCCA ATGGATTTAA CAATATTAGC AATCAAGAGT TTGCCGATAT TGAAAATAAA TGGATGCTCA ATCCCAAAGA TCATGTTTTT ACCCAAACTG AACGGCATGT CAGCTTAAGC CCTGCAGAAC AGGCCTATGT GGAAAGTGTA GGCGAGCTTA AAGTGGGCTA TTTAAAGCAA TGGCCGCCGA TGGAGTTTAT GGATGAGCAG GGCGAGTTTG CGGGGATCAA CAGCGATATC GTCAAATTAC TCAAGGAACA GCTCAAACTT AAGCTCACGC CCGTTGCCTT TGATGATTGG CATTCGTTAA TCGAGGCGTT GCAAAAGGGC GAGGTAAGTT TAGCCGGCAG TGTCGCCCAA ACGGCAGAGC GCCAGCAGCG TTTAGCGTTT AGTGAGGCTT ATTGGCCATC GCCGTGGGCA TTAGTGTCGC AATTGGAGCA AGTCTCGGTA TTCAATATTG CGCAGCTCGC AGGACAAAGG GTAGCTGTGG TCGAAGGCTA TCATTTAGTG GCGCAATTGA TGAGTCTTGA ACCTTCACTC AAGTTAGTGA TAGTGCCAAA TACGCAGGCG GGATTGGCGG CGGTAACGAA TGGCAATGCG GATGTGTTTA TCGATAAAGT GGTGACGTTG GCGTCTGAAC TTAAAACCAG CCACTATCCG ACGCTGAAAA TGTCGCTGCT GAGTGATCTT GCCGATCAGC ATAGCCATAT TGGTGTTTAT CCTCAGTTTG CGCCGCTGGT GCCACTGATT AACAAAGCCT TAGCCTTGAT TGATACTCAG CATCAGCAGC AAATTTATGC GCGTTGGGTG TCATTTTCTG TCGCGACAGA GAGTGCTAAA TATCTGCTAT GGCTGCGTTA TATCGTATTT GGCGTGATAA TCTTGTGCTC AGTGATGGTG GCAGTGTTGT TAGTAAATCG CCGCTTAAAT CGTGAGATCA CCCAGCGATT AGTCGCTGAA AAACGTTTGC TGCATGTGGC GAACCACGAT GCTTTGACTC AGTTACCTAA CCGCGCCTTG CTCGATGACA GATTAGCCCA AGCTTTGCTG TCCCATCAGC GCGAGCAAGC GCATTTTGCC TTGCTATTTA TCGATCTGGA TGGATTTAAA CAAATCAATG ATCAACATGG TCATCCGATT GGCGATGAAT TACTGGTACA AGTTGCCCGA AAGTTAACCA AGGTTATCCG TGGCTCAGAT ACCGTGGCGC GATTTGGTGG CGATGAATTT GTTATCCTGC TAAATCGTGT GCAAGATCTC GATGCTGCAA CCCAAGTTGC TGATAATATT CTACAGGCAC TGTCGAGCCC TTTGCTTATT CAAGGTGTCA GTGTCAGCAT AGCGGTTAGT ATGGGCGTGG TGATTTACCC CCGCGATGGT GATACCGCGA TAGGCTTATT GAAAAAAGCC GATCAGTTAA TGTACCAAGC AAAAAGTTGC GGCGGGCGTT GTTATCGCTC AGCTTGA
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Protein sequence | MILCSCFLSI TGQASPLPDE PLIVVMGEDS FPYQYVDNDG EPTGLLVDLW KEWAKQSHTQ VVFVARHWHE SLDQLRQGKA QVHIGMGKTP EREQEFDFAE PIADVGTFLY LHKSLQGKKS IKELIPFQIG VVAASSHEAE LHRIEPQLVF KRYESREKLL AGVAAGEIMV FAGLEGYLKD PASSQEIAAN YPNTARIQIK AMQFVPAVKK GNLDLVDRIN KGFTALDPHF IQQTERRWLG YQRQQAGIVI SMQLGAEPFV DLGVDGLPHG LYVDMWQLWS EKTGIAVDFI SGDMNSSVDD VRRGLADAHI GYPESDDVKT GLNRAWHLYT VKSRLFLFQQ QLTDLDSLKG KRIGVVPTAP YLVELRKALP QMALRYYDNM DAMVAGARSG EIAGFVASGA WTSHYLLLNK GWSDFSQYPN LEFSTNIYVL TRSDDPGLTQ RIANGFNNIS NQEFADIENK WMLNPKDHVF TQTERHVSLS PAEQAYVESV GELKVGYLKQ WPPMEFMDEQ GEFAGINSDI VKLLKEQLKL KLTPVAFDDW HSLIEALQKG EVSLAGSVAQ TAERQQRLAF SEAYWPSPWA LVSQLEQVSV FNIAQLAGQR VAVVEGYHLV AQLMSLEPSL KLVIVPNTQA GLAAVTNGNA DVFIDKVVTL ASELKTSHYP TLKMSLLSDL ADQHSHIGVY PQFAPLVPLI NKALALIDTQ HQQQIYARWV SFSVATESAK YLLWLRYIVF GVIILCSVMV AVLLVNRRLN REITQRLVAE KRLLHVANHD ALTQLPNRAL LDDRLAQALL SHQREQAHFA LLFIDLDGFK QINDQHGHPI GDELLVQVAR KLTKVIRGSD TVARFGGDEF VILLNRVQDL DAATQVADNI LQALSSPLLI QGVSVSIAVS MGVVIYPRDG DTAIGLLKKA DQLMYQAKSC GGRCYRSA
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