| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2290 |
|---|
| Symbol | |
|---|
| ID | 5373487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 2730511 |
|---|
| End bp | 2732799 |
|---|
| Gene Length | 2289 bp |
|---|
| Protein Length | 762 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640830504 |
|---|
| Product | ribonucleotide-diphosphate reductase subunit alpha |
|---|
| Protein accession | YP_001366491 |
|---|
| Protein GI | 153000810 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0215742 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGCA CTATGACAGT CACAAAACGC TGTGGCGATC GTGAAAATAT CGATCTCGAA
AAAATACACC GCGTAATTAC TTGGGCAGCC AAGGGATTAA AAAACGTTTC TGTTTCTGAA
GTTGAACTTC GCTCGCACCT ACAGTTTTTC GATGGCATTC CAACCGAAGC TATCCATGAA
ACCATTATCA AAGCGGCGGC GGATTTAATT TCTCCAGAAT CACCGGACTA TCAGTTCCTC
GCCGCCCGTT TAGCGGTGTT TCATTTGCGT AAGAAGGCCT TCGGTCAGTT CGAGCCGCCA
GCACTGTATA CCCACGTGAC TAAGTTAGTT GAGCTTGGCA AGTATGACAT GCACATTCTG
CAGGATTACA GCCGCGAAGA ACTCGACGTG ATGGATACCT ATATCGACCA TTGGCGCGAT
ATGGACTTCT CTTACGCTGC GGTAAAACAG CTTGAAGGCA AATATTTAGT TCAAAACCGT
GTGACGCACG AAATCTATGA GAGCGCCCAG TTCCTCTACA TTTTGGTCGC GGCCTGTTTG
TTTGCCCGTT ATCCAAAAGA AACGCGCCTG AAATACGTTA AAGATTTCTA TGACGCGGTA
TCGACCTTTA AGATTTCGCT ACCGACGCCA ATCATGGCCG GTGTGCGCAC GCCAACGCGT
CAGTTCAGCT CTTGCGTACT GATCGAATGT GGTGACAGCT TAGATTCAAT CAACGCGACA
GCTTCGTCTA TCGTGAAATA CGTCAGCCAA CGTGCGGGTA TCGGTATTAA CGCCGGTCGT
ATTCGCGCCT TAGGTAGCCC AATCCGTGGT GGTGAAGCCT TCCACACAGG TTGTTTACCT
TTCTATAAGT ATTTCCAAAC CGCAGTGAAG TCTTGTTCTC AAGGCGGCGT GCGTGGCGGT
GCTGCGACCC TGTTCTACCC TATTTGGCAC TTAGAAGTCG AATCTCTGCT GGTATTGAAA
AATAACCGCG GCGTCGAAGA CAACCGTATC CGTCATTTAG ACTACGGTGT GCAGCTGAAC
AAAGTCATGT ATCAACGTCT GATCAAAGGC GAAAACATCA GCCTGTTTAG CCCATCTGAC
GTACCTGGCT TATATGATGC TTTCTTTGAA GATCAAAACG AATTCGAACG TTTATATGTG
CAATATGAGC AAGACAGCAG CATTCGTAAG AAAACCATAA AGGCAGTTGA GCTGTTTTCA
CTGATGATGC AAGAGCGCGC CTCAACTGGC CGTATCTACA TTCAAAACGT GGATCACTGC
AACACTCACA GCCCGTTCGA TTCAAAAGTC GCACCGATCA GACAGTCTAA CCTGTGTCTT
GAAATCGCCC TGCCGACTAA ACCATTGAAC AACATCGATG ATCCAGAAGG TGAAATCGCG
CTTTGTACGC TGTCAGCACT TAACTTAGGT TCTATCAAAG AATTATCTGA TATTGAGCCA
TTAGCCGACC TCGCCGTACG CGCACTGGAT AACCTGTTGG ATTATCAAGA TTACCCCATC
AAGGCAGCTC AAATTGCCTC GATGAATCGC CGTACCTTAG GCATAGGTGT GATTAACTTC
GCTAACTACT TAGCAAAAAA TGGCATGAAG TATTCCGATG GCAGCGCGAA CGAGCTGACC
CACAGAACCT TCGAAGCAAT TCAGTACTAT TTACTGAAAG CCTCGATGAA CTTGGCCAAA
GAGCAAGGTG CGTGTCCGTT ATTCCACGAG ACCACTTACT CTCAAGGTAT TTTGCCAATC
GATACCTACA AACGTGACCT AGATAAAATT TGTGCAGAAC CATTGCACTT AGACTGGGAA
TCACTGCGTA GCGATATCAA ACAATATGGC CTACGTAACT CAACGCTGTC GGCATTAATG
CCATCAGAAA CCTCGTCGCA AATCTCCAAT GCGACCAATG GTATCGAGCC ACCACGTGGT
CTTATCAGCG TGAAATCGAG CAAAGACGGT CAGCTAAAAC AAGTTGTACC AGATTTCGAT
ACGCTGAAAG ATAGCTATGA ATTGCTATGG AAAATGCCAA GCAACGACGG TTACTTACAG
CTAGTGGGTA TCATGCAGAA GTTCGTTGAC CAAGCGATTT CAGCCAACAC TAACTACGAT
CCTTCACGTT TTGAAGGCCG TAAAGTACCG ATGCAAACCC TGCTGAAAGA TTTGCTCAAT
GCTTACAAGT TAGGTGTGAA AACGCTTTAC TACCATAACA CTCGCGATGG TGCGTCGGAT
TCACACGATG ACATCACCAA TTTAGAGAAA GAAGACGATG GTTGCGCCGG CGGCGCGTGT
AAAATCTAG
|
|---|
| Protein sequence | MNSTMTVTKR CGDRENIDLE KIHRVITWAA KGLKNVSVSE VELRSHLQFF DGIPTEAIHE
TIIKAAADLI SPESPDYQFL AARLAVFHLR KKAFGQFEPP ALYTHVTKLV ELGKYDMHIL
QDYSREELDV MDTYIDHWRD MDFSYAAVKQ LEGKYLVQNR VTHEIYESAQ FLYILVAACL
FARYPKETRL KYVKDFYDAV STFKISLPTP IMAGVRTPTR QFSSCVLIEC GDSLDSINAT
ASSIVKYVSQ RAGIGINAGR IRALGSPIRG GEAFHTGCLP FYKYFQTAVK SCSQGGVRGG
AATLFYPIWH LEVESLLVLK NNRGVEDNRI RHLDYGVQLN KVMYQRLIKG ENISLFSPSD
VPGLYDAFFE DQNEFERLYV QYEQDSSIRK KTIKAVELFS LMMQERASTG RIYIQNVDHC
NTHSPFDSKV APIRQSNLCL EIALPTKPLN NIDDPEGEIA LCTLSALNLG SIKELSDIEP
LADLAVRALD NLLDYQDYPI KAAQIASMNR RTLGIGVINF ANYLAKNGMK YSDGSANELT
HRTFEAIQYY LLKASMNLAK EQGACPLFHE TTYSQGILPI DTYKRDLDKI CAEPLHLDWE
SLRSDIKQYG LRNSTLSALM PSETSSQISN ATNGIEPPRG LISVKSSKDG QLKQVVPDFD
TLKDSYELLW KMPSNDGYLQ LVGIMQKFVD QAISANTNYD PSRFEGRKVP MQTLLKDLLN
AYKLGVKTLY YHNTRDGASD SHDDITNLEK EDDGCAGGAC KI
|
|---|
| |