| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2289 |
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| Symbol | |
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| ID | 5373553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2729313 |
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| End bp | 2729984 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640830503 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001366490 |
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| Protein GI | 153000809 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000247556 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCTGG CACAGATCCA AGGCGTACTG TTCGATCTCG ACGGCACCTT AGCCGATACC
GCGCCGGATC TGGTGCAGGC CCTCAATTTA AGTCTTCAGG ACGTCGGCAT CGCCGCGCAG
CCGTTAGCGG CCATGCGCTA CGCCGCATCC CACGGCAGCT TTGCTTTAGT CGATGCGGCG
ATCCCCAATG CAGCGGATGA TCTTCGCACT CAAGTTCAGC AAGGGCTGCT CGCCCACTAT
CAGCGCATTA ATGGCGATAA CTGTGCGCTA TTCACAGGCA TTGCAGCATT ACTCGACTGG
CTCGAGTTAA TGCAGCTGCC GTTTGGGGTG ATCACCAACA AGCCTGCCCG CTTTACCCGT
CCCTTATTGC GAAAACTGAA TTTACACTTA CGTATGCCCG TTATCATCAG TGGCGATTCG
ACCAAACACC CAAAACCCCA CACGGCACCT ATGTTATTAG GGGCTCAGCA ACTGAACTGC
GCTCCAGAGC ATATTTTGTA TCTTGGGGAT GCTGAGCGGG ATTTGTTGGC AGCTAAGGCG
GCGGGCATGT TAGGCGGCGT TGCCCTATGG GGTTATCTGG GTGTCAACGA CCAGCCATTA
CAGTGGCCAG CTCACGCGCA CTTTGCCAGC CCAACTGAGT TACATCAGGC ATTAGTCGAC
GCATTGGCCT AG
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| Protein sequence | MSLAQIQGVL FDLDGTLADT APDLVQALNL SLQDVGIAAQ PLAAMRYAAS HGSFALVDAA
IPNAADDLRT QVQQGLLAHY QRINGDNCAL FTGIAALLDW LELMQLPFGV ITNKPARFTR
PLLRKLNLHL RMPVIISGDS TKHPKPHTAP MLLGAQQLNC APEHILYLGD AERDLLAAKA
AGMLGGVALW GYLGVNDQPL QWPAHAHFAS PTELHQALVD ALA
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