| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2283 |
|---|
| Symbol | |
|---|
| ID | 5373538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 2720479 |
|---|
| End bp | 2722041 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640830497 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001366484 |
|---|
| Protein GI | 153000803 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.02604 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTATTAC AAGATAAATT AGTGCAAATC GTCACCAACC CGCAGCTTTC ACCTAAGCAA
AAATCCAACT ATTTAGCGTT GGAGGCAGAG GCGAGCTTGC CCTACATGCC GATATCGACT
GAGGTAAAAG CGGCGATGAA TGATGGTATT ATTTGCGACA TGTTTGAAGG CCATGCGCCA
TTTAAACCAC GCTATGTGTT GCCAGATTAT GCCCGCTATC TAAAGCAAGG TTCAGAATAT
TTAGAGCTTT CACCGGCGCA GGATTTAGAT GAAGCCATCA ATGCCTTGAC CATCCTTTAT
CACCACGTGC CTTCTGTGAC CAATATCCCC GTGTATTTAG GTCAGCTGGA TGACATATTA
ATGCCTTTCA TCGAGGGAAT GGATGCGGAA GTCCTTTATC GTAAACTTAA ACTGTTCTGG
ATCATGCTCG ACAGAACCCT GCCCGACGCC TTTATGCACG TCAATATTGG CCCGACAGAC
AACATTGTTT GCCGCACCCT ACTGCGCATT GATGCCGAGT TAAAACAAGT TGCCCCCAAT
TTGACCTTTA TGTACGACCC CGCCGTCACG CCAGATGATT TGTTGCTGCT TGCGACCACC
AATATTTGTC ACTGCAGTAA GCCGCATATC GCCAATTATC CTCTGCATGC CAGTGCGTTT
GATGAGCACG GTTTTGGGAT TGTCAGTTGC TACAATGCCT TGCCGTTAGC GGGCGGCGCC
AATACCTTGG TTCGGCTCAA TCTTAAAGAA GTTGCGTTAA AGGCCAATTC TATAAACGAT
TTTTTTGATA CTGTATTGCC AAATTACTGC TCACTCACCT TTGAACTTAT CGAGGCGCGC
TCGGCATTTT TGCATCAAGA ATCACACTTT TTTGACAGTT TTTTAGTTAA AGAACAATTG
ATTGATGAGT CGCGTTTTGC GCCTATGTTT GGCATTTACG GCATGGCGGA AGCGGTGAAT
ATTCTGCAAT CATTCACGGC CAGTGGAGAA GTTAAATCAG CTAAACACGC TAGCAATGGT
CTTGAATATG GCCATGAAAT GGATGCAAAT CAGCTGGGCT ATCGTATTTC TGCTGCGCTC
GATACCATAG TGAAATCCAC ACCCGTCGCG CATGGCTACC ATGGACGAGC ACTGCTGCAT
TCACAGGGCG GCATCAGTAT CGACAAAGAC GTTACTCCAG GCGTTCGCAT TCCCTATGGT
ACTGAACCTA ATCCCATCGC TCACATTCAA GCCTTAGCCC AACATCATCA GTATTATACG
GCGGGGATTA GCGATATTTT GACTATCGAT GAAACTATAA AATCCAACCC TCAAGCCATG
TTCCAGCTAT GTAAAGCCGC GCTTGAGTTA GGTTTTAGGG AATTTACCGC CAATGTCGCC
TCTAATGATT TAATGCGCGT GACCGGCTAT ATGGTAAAAC GCTCGGATAT TGAAGCGTTT
AAGCAGTGCG GCTCACGCCT CAATACCACG GGCTTAGCCG CAGAAGCGGC GGTTAATACA
GGGATATTAC AACGCCAAGC ACGAGTCATA GCCCATGAAC ACTCCCCTTG TGTCTTTGAA
TAG
|
|---|
| Protein sequence | MLLQDKLVQI VTNPQLSPKQ KSNYLALEAE ASLPYMPIST EVKAAMNDGI ICDMFEGHAP
FKPRYVLPDY ARYLKQGSEY LELSPAQDLD EAINALTILY HHVPSVTNIP VYLGQLDDIL
MPFIEGMDAE VLYRKLKLFW IMLDRTLPDA FMHVNIGPTD NIVCRTLLRI DAELKQVAPN
LTFMYDPAVT PDDLLLLATT NICHCSKPHI ANYPLHASAF DEHGFGIVSC YNALPLAGGA
NTLVRLNLKE VALKANSIND FFDTVLPNYC SLTFELIEAR SAFLHQESHF FDSFLVKEQL
IDESRFAPMF GIYGMAEAVN ILQSFTASGE VKSAKHASNG LEYGHEMDAN QLGYRISAAL
DTIVKSTPVA HGYHGRALLH SQGGISIDKD VTPGVRIPYG TEPNPIAHIQ ALAQHHQYYT
AGISDILTID ETIKSNPQAM FQLCKAALEL GFREFTANVA SNDLMRVTGY MVKRSDIEAF
KQCGSRLNTT GLAAEAAVNT GILQRQARVI AHEHSPCVFE
|
|---|
| |