Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2271 |
Symbol | |
ID | 5370246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 2706682 |
End bp | 2708190 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640830485 |
Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
Protein accession | YP_001366472 |
Protein GI | 153000791 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000670154 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACGT TACTGAAAAC CACTCTGTAT GCCAGCCTAC TCTTAGCGGC GAGCCACACT ATCGCCCGCG CTGATCAAAT CGACGCAGGA GCGATAGAGA CCCGAACCAC TTCGCTTAGC CAAGCGGTCG GCAAAATCAG CCCTCGTCAT TCGCAAATTG CACTGCTGGC AATGGACATG TCTAACAATC AAGTGATCTT TAGCCAACAG GCCGAGACGC TGTTTATTCC CGCCAGCACG CAAAAATTAC TCACCGCTGT GAGCGCCATG ACTCAGCTTG GGCCTGATTT TCGTTATGTC ACTGAATTAT GGACGGACGC ACCAATACGC AAGGGCCATA TCGCCGGCAG CGCTTATCTG CGTTTTAGTG GCGATCCGAC GTTCACTCAA GCCGATCTCA AGGCCATTTT TGCCAGTCTC GTGAAACAAG GCATTAATCG CATTGATGGA CATCTGTATT TGCTCGGCGA TAAAAAAGAG CAAATGCAAG CCCCTGGCTG GGTTTGGGAT GACTTAGGCA TTTGTTTTGC CGCGCCTGTG TCGAGTTACA TTATCAATCA AAACTGCGTC TATGGTCAGT TCAACCCCAG CACGGCCAAT AAACCATCGC AGGTGAGCCT GCGCACGGGG AGTTATGGGG TAAAAGTCAG CAGCGATGCG GTATTTGATC CCAAGGCGAG TCGTGAATTT TGCCAGCTCG ATTTGGTACG ACTAGGCCAA AACAACTATC ATCTACGTGG TTGTTATCCG GGCGGTGAAG CGATTGGACT GGCGATTGCG GTCAGCGATC CGTTCAAATT TGCCCAAGAT AACCTCACCT CGCTGCTCAA AGGCGAGATG TCACTGGCGG GTAAAGTTAA GCTCGGCACT AGCTTGCCCA AAAAGGCGAA ACTGATTGCC AGCCATAGCT CGGCGCCACT GCCTGAACTG CTCGATACTA TGTTGCTCAA GTCGGATAAT TTGATTGCTG ATAGCCTGTT TAAACAGCTT GGCAAAAGTT ATTTCAACAC CCAAGGTAGC TTTACCAATG GTGCGGCAGC CATGCTGCGG ATTTTAACGG AGTTAGGCGT CGATCTGAGT AACGCTAACA TTGTCGATGG TTCAGGGCTG TCACGCTATA ACTTGCTCAA TGCACAGCAG TTAGCGGCGG TATTGGCACT CATCCATAAG GACAGCCGCT TTAGCACGTT AATGACCAGT CTGCCGCAAG CAGGAATAAG CGGCACCTTA AGGTATCGCA TGGGTTACAA CAAGCCGCCG CTGAAAAAGC AAATTTTTGC TAAAACAGGC TCGATGCAAG GCGTGTCTAA CTTAGCGGGG TTCATCCGTT TGCCTGAGCA CAGTGACACC CTGTTTGTGG TGCTTGAGAA TGGCATGAGT CCCGAGCTTA AACATCAGCA TAAACCATCG TTTAATGCCG AGTTTCTCAA GCAATTGATT TCAGTGCTGC AAGTGCCATC CCCCACCACA GCAGCGCTTA GTACCGCTGC TCACTCGGTC CAAGATTAA
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Protein sequence | METLLKTTLY ASLLLAASHT IARADQIDAG AIETRTTSLS QAVGKISPRH SQIALLAMDM SNNQVIFSQQ AETLFIPAST QKLLTAVSAM TQLGPDFRYV TELWTDAPIR KGHIAGSAYL RFSGDPTFTQ ADLKAIFASL VKQGINRIDG HLYLLGDKKE QMQAPGWVWD DLGICFAAPV SSYIINQNCV YGQFNPSTAN KPSQVSLRTG SYGVKVSSDA VFDPKASREF CQLDLVRLGQ NNYHLRGCYP GGEAIGLAIA VSDPFKFAQD NLTSLLKGEM SLAGKVKLGT SLPKKAKLIA SHSSAPLPEL LDTMLLKSDN LIADSLFKQL GKSYFNTQGS FTNGAAAMLR ILTELGVDLS NANIVDGSGL SRYNLLNAQQ LAAVLALIHK DSRFSTLMTS LPQAGISGTL RYRMGYNKPP LKKQIFAKTG SMQGVSNLAG FIRLPEHSDT LFVVLENGMS PELKHQHKPS FNAEFLKQLI SVLQVPSPTT AALSTAAHSV QD
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