| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2266 |
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| Symbol | ampC |
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| ID | 5370977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2701268 |
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| End bp | 2702452 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640830480 |
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| Product | beta-lactamase |
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| Protein accession | YP_001366467 |
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| Protein GI | 153000786 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.54757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGAC ATACCCTGCT CGCTACCATG CCGTTATTAA GCGGTGTACT GCTCACTGCA
ACGCTTTTTT CTAATGTCAC TACGGCCCAA ACGCTTAATT CCAAAGACAT CCAGTCACTT
GTTGATTCCG CAGTCAAACC ACTGATGGCC GAGTACGGTA TTCCCGGTGC GGTGATTGGC
ATCACCATTG AGGGTAAACA GTATTTTTAC CAATATGGGG TCAGTTCTAA AACCACAGGG
CAAAGTGTGA CAGAACATAC CCTGTTCGAG ATTGGTTCTA TCAGTAAAAC CTTTACCGCG
ACACTGGCGA ACTATGCACA AATCGAAGGC AAGTTATCAC TCACGGATAT GGCCAGTGAT
TATGTTCCTG CATTAAAAGG CAGCCATTTT GACGAGATTA GTCTCATCAA TTTAGCGACG
CACACTGCGG GAGATCTGCC GATGCAAGTG CCCGACAAGG TCACGAATAA CGCAGAATTA
ATGGACTATC TTAAGCATTG GCAACCGTCA TTTGCCCCAG GGACTCACAG GAATTACGCC
AATCCTAGCA TTGGCCTGCT CGGCATGATT GCCGCACAGA GTTTAAATAA AACGTTTGAA
CAAGCACTTG AGCAAACGCT ATTTCCACAA TTAGGTATGA CCAGCAGCTA TATCCAGGTT
CCGAGCAGCA AAATGGCTGA TTATGCCCAA GGCTACAATA AGCAAGACAT GCCAGTGCGG
GTCAATCCCG GCGTATTAGC CGATGAAGCC TATGGCGTTA AAACCACAGC CACGGATCTG
CTGCATTTTG TGGAGGCCAA TATGCAAATG CACCCGCTAG CTAAGCCACT GCAAACGGCA
CTCGATGAGA CCCACACGGG ATACTTTGAT GTGGGCATGA TGACCCAAGA TATGATTTGG
GAGCATTACT CCTATCCTAT TGATCTTGAT AAAATACTTA TGGGCCACAC TCAGGAAGTG
GTGTTTGGCA GTACGCCAGT AAAACCCATA GTGCCGCCCC TCGCGCCGCA GCAAAATGTG
TGGATTAATA AAACCGGCTC AACCGGCGGT TTTGCCGCTT ATGCAGCATT TATTCCCGCG
CAAAAGCTTG GCATAGTATT GTTAAGCAAT AAAAATTATC CCGTTCCGCC ACGGGTGACT
GTGGGGTATC AGATTTTAAC GGGCATAGAA AAACTACAAA AATAG
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| Protein sequence | MQRHTLLATM PLLSGVLLTA TLFSNVTTAQ TLNSKDIQSL VDSAVKPLMA EYGIPGAVIG
ITIEGKQYFY QYGVSSKTTG QSVTEHTLFE IGSISKTFTA TLANYAQIEG KLSLTDMASD
YVPALKGSHF DEISLINLAT HTAGDLPMQV PDKVTNNAEL MDYLKHWQPS FAPGTHRNYA
NPSIGLLGMI AAQSLNKTFE QALEQTLFPQ LGMTSSYIQV PSSKMADYAQ GYNKQDMPVR
VNPGVLADEA YGVKTTATDL LHFVEANMQM HPLAKPLQTA LDETHTGYFD VGMMTQDMIW
EHYSYPIDLD KILMGHTQEV VFGSTPVKPI VPPLAPQQNV WINKTGSTGG FAAYAAFIPA
QKLGIVLLSN KNYPVPPRVT VGYQILTGIE KLQK
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